Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0071 |
Symbol | miaA |
ID | 6119781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 88217 |
End bp | 89170 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648158 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001774743 |
Protein GI | 170729310 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCG ACACGAGACC AGCCGCAATT GTACTCATGG GGCCAACCGC AAGCGGAAAA AGCCAACTGG CTATTGATAT TGCCAAACGT TGGGGAGGGG AAGTCATTAG TGTTGACTCG GTTCTGGTCT ATCGTGGCTT AGACATCGGT ACCGCAAAGC CGAACGCGGC AATGCGTGCA TCAGTACCGC ATCATTTGAT CGACATTTGT GAACCTTGGG AAACCTATTC TGCTGCCGAT TTCGCGCATG ATGCACGCGC CGCAATCGAC ATGATCGTTA GACGTGGCGC ATTACCAATC CTCACTGGCG GTACTGGACT GTACTTCCGT GCGTTACTGG CAGGTCTTTC GGATATGCCT CCAGCTCATC CTGAAATACG CGCGATGATC GCGGCTGAAG CCAAGAGAGA CAGTTGGGCA ACACTACACA CACGTTTGGC CGAAGTCGAT GCAATCACGG CTGCACGTAT CCATGCCACC GACCCACAGC GAATTCAGCG TGCATTGGAA GTCTATCTAG TGAGCGGACG ATCGATGAGT GATTGGCAAA ATCAGCCACC CAAACAACGG TTACCTTTGC GGGTTCTTAA GCTGGTGCTC GCACCGACCC ATCGCAAAGT ACTGCACTTC AGGATCGCGC AGCGCTTCAA GGCAATGTTG GATAACGGCC TACTTGCCGA GGTGAATGCG TTACGTACAC ACCCATCCAT CCACGCAATG GCTCGACCAC TGGATCTTCC AGCAATGCGT GCGGTTGGCT ACCGCCAATG TTGGGAACAC TTGGACGGCA TGTACACTGC CGAAATGCTG TATCAGCGCA GCGTTGCCGC CACACGTCAA CTGGCCAAAC GTCAGTTGAC GTGGCTACGT GGCGAGCTGG ATGCCCTTTG GTTCGATCCA GAACATGATC AATCCAGAAT AGAGAAAGTC ATGGAAGCAT TTTTAAACAG ATAA
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Protein sequence | MPADTRPAAI VLMGPTASGK SQLAIDIAKR WGGEVISVDS VLVYRGLDIG TAKPNAAMRA SVPHHLIDIC EPWETYSAAD FAHDARAAID MIVRRGALPI LTGGTGLYFR ALLAGLSDMP PAHPEIRAMI AAEAKRDSWA TLHTRLAEVD AITAARIHAT DPQRIQRALE VYLVSGRSMS DWQNQPPKQR LPLRVLKLVL APTHRKVLHF RIAQRFKAML DNGLLAEVNA LRTHPSIHAM ARPLDLPAMR AVGYRQCWEH LDGMYTAEML YQRSVAATRQ LAKRQLTWLR GELDALWFDP EHDQSRIEKV MEAFLNR
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