Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0040 |
Symbol | |
ID | 6121518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 43545 |
End bp | 44279 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641648127 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001774718 |
Protein GI | 170729285 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATGCAA TACTTCCTTG CTTTGGCGAG ATTCCTGAAT CGATCAATGA CTATAGGGAG TATGACTGTG AGGGGCATAG GAAGCATTCA CGTTGGATAG ATACCATCGG TGCTTCCTTT TGTTCCGAAG ATTCAGTGAG CGATGCATCG TTAGAGGGCA GCACCGCATC ATCTATCAGC GGATTTCGAA CATACATACC TTGGCCCATC TGGACACTAT CACTGTCTTC GCGCAGACTC GCCGCCTTGA GACTTTTAGG GTATCGAGTG CCCTTGGATT CCAATAGCAT GGCTCATTTG CTGCTGTTAC ATGGCCCTAA TTTGAATTTG CTTGGTACCC GTGAACCTGA GATCTACGGC CGTATCACGT TGCCGCAGAT TGATGCGGCC TTAGCCGAAC GCGCTGCGGC TGCTGGTCAC GGACTGAGTA GTTTGCAATC GAATGCCGAG CATGTGTTGA TTGAACGTAT TCATGCCACG CGGGAGGATG GCACTGCGTT TATCTTGATA AATCCTGGGG CGTTTACCCA TACCTCAGTG GCATTGCGTG ATGCGCTGCT TGCAGTAGCG CTCCCGTTCG TCGAAATTCA CCTTTCTAAC CCGCATACAC GTGAGCCGTT CCGCCATCAC AGCTATCTGG CTGACAAAGC CTTGGGCGTG GTGTGTGGTT TTGGGGTGGA CAGTTACCGT ATTGCTTTGG AGGGAGTGAT TGCCAGACTC GGTTCTGACG TCTGA
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Protein sequence | MHAILPCFGE IPESINDYRE YDCEGHRKHS RWIDTIGASF CSEDSVSDAS LEGSTASSIS GFRTYIPWPI WTLSLSSRRL AALRLLGYRV PLDSNSMAHL LLLHGPNLNL LGTREPEIYG RITLPQIDAA LAERAAAAGH GLSSLQSNAE HVLIERIHAT REDGTAFILI NPGAFTHTSV ALRDALLAVA LPFVEIHLSN PHTREPFRHH SYLADKALGV VCGFGVDSYR IALEGVIARL GSDV
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