Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0027 |
Symbol | |
ID | 6120888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 26281 |
End bp | 29928 |
Gene Length | 3648 bp |
Protein Length | 1215 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648114 |
Product | PilY1-like protein |
Protein accession | YP_001774705 |
Protein GI | 170729272 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAGTGTTTAA TGCGGCCTTG AATCGGGTGG CTGCGATATT GATCGGCACA CTCGTAGGTA TCAGCGGTGC GGTACATGCG AGTGTGGATA TCTCTTCGTC CCCATTGCAT GGCGGAAAGG ATGTGCCTGG TAACCTTGCC ATTCTTGCGT CTGTCGAATT TCCCACGTTG ATCAGCGTGG CTAATCTGGC CGACACCTAC ACACCAGGGG TGAGGTATGT TGGCTACTTC GATTCCAACA AGTGCTACAA ATACCACTAC AGTTCTCAGG AAAGTGATCG TTACTTCTAT CCCGTTGCTT CTCCAAGGCC TCAAGCCAAT TACGGTTGTA ATACCACAGG CGGGGTGTGG GCTGGGAATT TTCTGAATTG GGCCGCCACC CAGACGATTG ATCCATTTCG CTCCGCATTG ACTGGTGGCT ATCGTGTGCG CGACACCGTC AGCGAGACCA TCTTGGAAAA AGCAGTGATG GATCGTGATT CTCAGGAAAA TTTCCCGCGT CGTAATGTCG CAGGCCGCAA TGTGCTGGCT ACTTTATTGC CTACGCAGTG GAACAACTTC CGTATCCGTA TTGATGGTCT CGGCAACAGG ATGCGGTTTA CTCAGTTTTC CAGTTTATGG ACAGATCCTT TAAACACAGA GGGCCAACCT TACGATTCTT CCAGGCATCC ATTAAACAGC AATGATAGAG GCGTTTATGA AGTGAGCGTC CGAGTCAAAG TGTGTGATCC ATCTGCGGGC CTGGAGTCTA ATTGTGTCGC CTATCCCAGA GGCTCCTACA AACCCGAGGG GCTGATCCAG GAATATTCCA AGCGCATTCG GTACAGCGTC TTTGGCTATA AAAATGATCA CAGCTACTTG ATTGATGGTG GTGTCCTGCG TGCCCGCCAG AAGTTTGTTG GACCCCAAAC CCACTATCCG GAGCAAGGGA AGAAAACCAA TCCCCATGCC GAATGGGATC CGCAAACCGG CATCCTCTAT GACAACCCTG ATCCTGAGGA TGCTGCGGCG ACCACCCGGC GTGTGGGCCG TACCATTGCT AATTCCGGCG TCATCAACTA TTTGAACAAG TCCGGTCAAA TGGACACGGG TAGGATTTCA AAGATTTACG ATCCTGTCAG TGAGCTTTAC TACACGGCAT ACCGTTATTT TAAACGCCTG GGCAATGTCC CGGAATATTC GGTATTGACG GGTTCTGTGA ATGAAAAGTA CCAGCAGAGC GATGCGTTTC CGGTGATTAC CGATTGGGAT GACCCGATTC GTTATGCCTG CCAGAGCAAT GTTGTGTTGG GTATTGGAGA TACCCACACC AATCAGGATA AGAATCTGCC TGGGAATACC AACACAATGG AAGAGCCTTC CAAACCCCAA GCGGTCAGAA ATGACAGAAG CATTGACGTG GTCAAGCGCA TGGCGCAGAT CTTCCAGATG GAAGGCATGA GACAGCAGGA TGCTATGACG TCGGCTGTGG CACCTAAATT CAATTTTCAC AGATACAACT CAGCCTACAT TGCCGCTTTG GCCTACGATG CCCATACCAA GGACATGCGT CCTGATCTTG AAGGGGATCA GCTGTTCACG ACACATTGGG TGGATGTGGT GGAAGCGGGA GATTACAAAA AACCAGTATC AACCAACCAA TACTGGTTGG CCGCGAAATA TGGCGGATTT CAAGTGCCTG CCGGTTACGA TCCGGATAAG ACAGTTAACC CCCTGTCTGA GGCGACTTGG TGGACCAACG GCGAGTACGT CAATGGCGAT CCTAATGCCA AGCGGGCGGA CAATTTCTAC GTTGCCGCCG ACGCGGAAAA GATGGTAGCC AGCCTCAAAC AGGCCTTCTC GCGCATCGTT GCCGAGATCA AGGGGGCAGG GACGGGACTG TCTAGCAACA GCGCTAGACT TGAAACCGGT GCGGTTACCT ACCAGGCACA ATTTTTCAGT GGCACCTGGC GTGGTGATCT GATCGCCTAT CACGTAGATA AAGTGACCGG CGCGCTCACC CCATTTTGGA ACGCCAACTT CCCGGCATGG GAACAGCGTG TTATCAAGTT TGCCAATGCC ACCACACTGC AAGACTTCAC CAAAAAAAAT CTAGGCCAAA CCGCGCTGGC ATCGGCGAGT GCGCAGCAGA TTAATTACCT GCGTGGTGAT CGCAGCCAGG AAGGCAATGT GCCCGGCAAA CTCCGCATCC GCAGCGGCAT CATGGGAGAT ATTGTCAACT CCCAACCGCT CTATGTTGGT GCCCCCAATG GACGGCTGTA CACAACCGCG AACTTCACTG GGGCGAGCGC CTATGCCGCG TTCGCCGCCC AGCAGGCCAA CCGGGTGCCG GTGGTTTACG TGGGTGCCAA TGACGGCATG TTGCATGCCT TCGATGCCAA TACCGGTAAA GAAATATTTG CATTTGTGCC TCGTGCGGCC ATGCCCAAAT TGCTGGAGTA CACCGATCAG AACTACGTAC ACCAGTACTA CGTGGATGGT GAACTGACCG CCGCTGATAT TTACGATACC AAGTTGGGGT GGCGCTCGGT GCTGGTGGGG ACGTTGGGTC GAGGCGGCAA AGGTCTGTTT GCCTTGGATG TGACCGACCC TTCCAATATT CGTTTGCTGT GGGACAAAAC GTCCGCGGAT ATTGGCGGCT TGGGGAATAC CTTGAGCAAA CCGATGATTG TGCAGACCTC CGATGGCACC TGGTCGGTAT TGCTTGGCAA TGGTCCAAAC AGCACTGCGG ATAACGCGCA ACTGATCGTG ATGAATCTGT TGACCGGTCA TGCAGCCCAA GTGCCCGTTA GCAAGACCTC AAACAATGGA CTGTCTGGTG TATTTCCCTG GTCCAGCCAG AGCAACGGCA TTACGGATCG CGTGTATGCA GGTGACCTGC TGGGCACGTT GTGGCGCTTT ACTTTTAGCG ATAACGCTTG GAAGGTGGTG CCGCTGTTTA CTGCCACGTA TCAAGGGAAG GCACAGCCGA TCAGCGCAAC TCCGCTGGGG GCCATTGAGC GCTCCACGGG GCGGATGTGG ATTTTCTTTG GGACAGGGAG AGTGTTGTCT TCGCATGATA TGGATAACAA GGAGGTACAG AGCTGGTATG GCCTGATTGA CCAGGGAACG ACGATTTCTG GGCGTACTGG GCTGAGCCAG GTACAGATTG TTGATGAGGG TGTAGTCAAT GGGTATGCCG TGCGTACGGT TTCTGATCCT AAGAATATAG GTACTGATGG CTGGTATATG GATCTGATTT CGCCGAAATC CGGTAAGCAG GGAGAACGGA TGATTGTGTC CAACATGTTC CGTGGAGCGG CGTTGATCGG GACCACTCGT ATTCCGGATA ACAGCGACAT TTGCAAGCTC AGCGGCAGTG GGTTTGTCAT GGCGATCAAC CCATTCACTG GTGGCCGGTT GGGTCAATGG TTTTTTGATC TCAACACTGG TGGTGGCAGT GGTGGTAGTG GTGGTGCGTT GAATGGTAAT CCAGTGTCTG GTGTGGGTGT GAGCAGTGCG CCGAATAGCC CTGTATTTAC CGGCAATATC ATGCAAATAG GAGCGGATGA CGGTACGGTT ACGTCGTTGA AGACGCCCTC CAGCGGAGGC CTCAATATAA ACCGTGTGTC ATGGCGTGAA ATCTTGAGGA CTGAGTAA
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Protein sequence | MKKTVFNAAL NRVAAILIGT LVGISGAVHA SVDISSSPLH GGKDVPGNLA ILASVEFPTL ISVANLADTY TPGVRYVGYF DSNKCYKYHY SSQESDRYFY PVASPRPQAN YGCNTTGGVW AGNFLNWAAT QTIDPFRSAL TGGYRVRDTV SETILEKAVM DRDSQENFPR RNVAGRNVLA TLLPTQWNNF RIRIDGLGNR MRFTQFSSLW TDPLNTEGQP YDSSRHPLNS NDRGVYEVSV RVKVCDPSAG LESNCVAYPR GSYKPEGLIQ EYSKRIRYSV FGYKNDHSYL IDGGVLRARQ KFVGPQTHYP EQGKKTNPHA EWDPQTGILY DNPDPEDAAA TTRRVGRTIA NSGVINYLNK SGQMDTGRIS KIYDPVSELY YTAYRYFKRL GNVPEYSVLT GSVNEKYQQS DAFPVITDWD DPIRYACQSN VVLGIGDTHT NQDKNLPGNT NTMEEPSKPQ AVRNDRSIDV VKRMAQIFQM EGMRQQDAMT SAVAPKFNFH RYNSAYIAAL AYDAHTKDMR PDLEGDQLFT THWVDVVEAG DYKKPVSTNQ YWLAAKYGGF QVPAGYDPDK TVNPLSEATW WTNGEYVNGD PNAKRADNFY VAADAEKMVA SLKQAFSRIV AEIKGAGTGL SSNSARLETG AVTYQAQFFS GTWRGDLIAY HVDKVTGALT PFWNANFPAW EQRVIKFANA TTLQDFTKKN LGQTALASAS AQQINYLRGD RSQEGNVPGK LRIRSGIMGD IVNSQPLYVG APNGRLYTTA NFTGASAYAA FAAQQANRVP VVYVGANDGM LHAFDANTGK EIFAFVPRAA MPKLLEYTDQ NYVHQYYVDG ELTAADIYDT KLGWRSVLVG TLGRGGKGLF ALDVTDPSNI RLLWDKTSAD IGGLGNTLSK PMIVQTSDGT WSVLLGNGPN STADNAQLIV MNLLTGHAAQ VPVSKTSNNG LSGVFPWSSQ SNGITDRVYA GDLLGTLWRF TFSDNAWKVV PLFTATYQGK AQPISATPLG AIERSTGRMW IFFGTGRVLS SHDMDNKEVQ SWYGLIDQGT TISGRTGLSQ VQIVDEGVVN GYAVRTVSDP KNIGTDGWYM DLISPKSGKQ GERMIVSNMF RGAALIGTTR IPDNSDICKL SGSGFVMAIN PFTGGRLGQW FFDLNTGGGS GGSGGALNGN PVSGVGVSSA PNSPVFTGNI MQIGADDGTV TSLKTPSSGG LNINRVSWRE ILRTE
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