Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0021 |
Symbol | |
ID | 6120882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 21409 |
End bp | 22572 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641648109 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001774700 |
Protein GI | 170729267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTTGG CGGCTTTTTT ATTGTCTCCT CCGCTTGGTC TATGTCTAAA TGTTCTGAGA TTACATCCCA TGCCACCATT TACCGACGAC CTCCGTATCC GAAAAATTGA ACCACTGACA CCTCCTAACA AGCTCCTCTT GCAACTACCA TGCGATGAGC AGGCATCGCT GACTGTTGCG ACCTCACGCA ACGCACTGCA CGATATCCTG CACGGCCACA ACGACCGTTT AGCCGTCGTG ATAGGCCCAT GCTCAATCCA TGATCCAATT GCAGCCATTG ATTACGCGCA ACGTCTGCAC CCATTGCGAG AGATGTACAA GGATGCACTA GAGATCGTGA TGCGGGTTTA CTTTCAGAAA CCGCGCACCA CTATTGGTTG GAAAGGATTG GTCAACGATC CGGATCTTGA TGGCAGCTTC CAGATCAATA AGGGCTTGCA TATCGCGCGC AACCTGCTGC GCGATATCAA TCATCTCGGC TTACCCGCCG GTGTGGAATT TCTAGACACG ATTTCGCCGC AATATCTGGC TGACTTAGTC GCCTGGGGTG CCATTGGTGC ACGCACCACT GAGAGCCAAA TACACCGTGA AATGGCTTCA GGTTTATCGT GCCCGATTGG CTTTAAAAAC AGTACCAGTG GTGATGTGAA GATTGCTGCT GACGCGATTA AAGCAGCTTC GCATCCGCAC CATTTCCTTT CAGTGACAAA GACAGGTGTT GCCGCAGTCG TCGCCACCCA GGGTAACCCC GATTGTCACG TGATTCTGCG TGGAGGCAAG GTCCCGAATT ATGACGCAAT CAATGTCGAA GCTGCCAGCC AAACATTGCT TAAATCCAAG CTACCGGTGC GACTGATGAT TGATGCGAGC CATGCCAATA GCGGCAAAAA TCCAAACAAT CAACCTAAGG TGATCGAGAA CATCGTAGAA CAGCTTAAAG CCGGTGAACG CCGCATCATC GGTGTCATGA TTGAAAGCCA CCTTGTTGGT GGTCGGCAAG AATTAGTCCT TGGAAACACA CTTACCTATG GACAGAGCAT TACCGATGCT TGCATCGACT GGGATACCTC GGTCGCAATG TTAGAACAGC TCGCTCAGGC CGTACGCGTC AGACAGACTC TACCAACGAC CGCTACAGCT AACAAAACAT CAAAAACCCA ATAA
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Protein sequence | MCLAAFLLSP PLGLCLNVLR LHPMPPFTDD LRIRKIEPLT PPNKLLLQLP CDEQASLTVA TSRNALHDIL HGHNDRLAVV IGPCSIHDPI AAIDYAQRLH PLREMYKDAL EIVMRVYFQK PRTTIGWKGL VNDPDLDGSF QINKGLHIAR NLLRDINHLG LPAGVEFLDT ISPQYLADLV AWGAIGARTT ESQIHREMAS GLSCPIGFKN STSGDVKIAA DAIKAASHPH HFLSVTKTGV AAVVATQGNP DCHVILRGGK VPNYDAINVE AASQTLLKSK LPVRLMIDAS HANSGKNPNN QPKVIENIVE QLKAGERRII GVMIESHLVG GRQELVLGNT LTYGQSITDA CIDWDTSVAM LEQLAQAVRV RQTLPTTATA NKTSKTQ
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