| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0003 |
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| Symbol | recF |
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| ID | 6120010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 3041 |
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| End bp | 4135 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641648095 |
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| Product | recombination protein F |
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| Protein accession | YP_001774687 |
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| Protein GI | 170729254 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0185053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATCA CTCAGCTCGT ATTACGTCAT TTTCGTTGTT TTGATGTCGT TGATTTCTTT
CCATTACCTG GACTGAATTT TTTCATTGGT GAAAATGGTT CAGGTAAGAC TAGTTTACTT
GAAGCCGTAC ATTTAATGGG TTACGGGCGC AGCTTTCGCG GCAGGGTCCG TGATGGTTTA
ATCCGACATG GCTCTGAAAA TCTAGAAATT TTTGTGGATT GGCAAGAAAC TGCTTTAATT
AATGCACGTC GACATCGTGC AGGTTTAAGT CACTATGGGC AAGAATGGAT AGGACGTTTA
GATGGTCAAA AGATAATACA TTTGGCTAGT TTATGCGCTG CATTAGCAGT GATTACTTTT
GAATCAAGTA GTTACCAACT CATCAACAGT AACGCCGAAT TACGACGTCG GTTCTTGGAT
TGGGGATTAT TCCATGTTGA ACCAGATTTT CTGGATTTAT GGCGTTGCTA TACACATGTG
CTTAAACAAC GTAATTCTTT ACTTAAGCAG AAAGAAGAAT TAGCGATGTT AGAAGCTTGG
GATCAAAAAT TGAGTGAAGT TGGTGAACAA TTGACTTTCC GTCGGTTTCA ATATTTGGAG
AGATTGAAAC AACGAGTGAT CCCTTTAATT TCAAGAATAA CACCTAATTT AAAAATCCAT
GGTTTTAATT TTAATCATGG ATGGCGTCGT CACGAATTGC CGTTGATTGA TGCTTTATTT
ATTTCGCGTG AACGTGATTA TCAGTATGGT TATACTTCAT TAGGGCCGCA TCGTTCGGAT
TGGACTCCGC AATTTTCCAG TATTCCTGGA GTTCATGTTT TATCTCGTGG ACAAGGAAAA
CTTATAACAT TGATGTGCTT ACTAGCTCAG GCGCAGGACT TTTTTGATCA GCGTGGGGAG
TGGCCTATTC TTTCTTTAGA TGACTTGGCT TCAGAATTGG ATCAGAAACA TCAATGGCGC
GTGTTAGAGA TGTTAGCTGA AATTCCAGCC CAGGTCTTGA TCACGGGGAC CGAAATTCCC
CAAGGACTCA AGCCCTTTTT CTCAGTGGGT GCTATGTTTC ACGTGGAACA TGGCGCTATC
ACGCGAATGT TTTGA
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| Protein sequence | MHITQLVLRH FRCFDVVDFF PLPGLNFFIG ENGSGKTSLL EAVHLMGYGR SFRGRVRDGL
IRHGSENLEI FVDWQETALI NARRHRAGLS HYGQEWIGRL DGQKIIHLAS LCAALAVITF
ESSSYQLINS NAELRRRFLD WGLFHVEPDF LDLWRCYTHV LKQRNSLLKQ KEELAMLEAW
DQKLSEVGEQ LTFRRFQYLE RLKQRVIPLI SRITPNLKIH GFNFNHGWRR HELPLIDALF
ISRERDYQYG YTSLGPHRSD WTPQFSSIPG VHVLSRGQGK LITLMCLLAQ AQDFFDQRGE
WPILSLDDLA SELDQKHQWR VLEMLAEIPA QVLITGTEIP QGLKPFFSVG AMFHVEHGAI
TRMF
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