Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0002 |
Symbol | |
ID | 6120009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1637 |
End bp | 2737 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641648094 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001774686 |
Protein GI | 170729253 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0011847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCA GATTACAGCG CGAAACTTTC CTAAAACCAT TAGCTCACGT TGTAAACGTA GTAGAACGCC GTCAAACACG TTCTATCTTG GCTAATCTCC TAATAAAAGT TAATGAAGAT CAATTATCCT TAACTGGTAC AGATCTTGAA GTTGAGATGA TTTCAAAAAC AATAATTGAA GATGCGGAAA GCGGGGAGAT TACTATTCCT GCACGTAAAA TTTATGAAAT CGTTAGGGCT TTACCGGATG CTAGTCAACT AAGTGTATAT CAATCCGATG ATAAAATTAC CCTCCAAGCT GGTCGAAGCA AGTTTACCTT AGCTACATTA CCAGCTAATG ATTTTCCATC TATAGATAAA ATCGAAGTAA CGGAACGTAT TATTATTGCT GAAGTTTTAT TAAAGGAACT CATCGAGCGT ACTGCTTTTG CAATGGCCCA ACAAGATGTA CGTTATTATT TAAATGGTTT ATTGTTTGAT TTACGAGACA CTAAATTACG TTGTGTAGCT ACCGATGGCC ATCGTTTAGC ATTGTGTGAA ACTGAATTAG AACAAGCTAA AGATCTTAAA CGTCAGATTA TTTTGCCGCG TAAAGGCGTA ATGGAATTAC AACGTTTATT AGAAGGGAGT GATCGCCAAA TTGAGTTAGA AATTGCTCGT AACCACATTC GAATGAAATC TTTTGATGTA ACGTTTACTT CAAAATTGAT TGATGGTTCT TTCCCAGATT ATGAAGGAGT GATACCAATC GGTGCTGATC GTGAGGTAAA GGTTGCTCGT GAGGTTTTAC GTGATGCTCT TCAACGGGCT GCAATTTTAT CTAATGAAAA ATATCGTGGT GTGCGTATTG AAGTTTCACC TGGTCAGTTA AAAATTAATG CACATAACCC AGAGCAAGAA GAAGCACAGG AGGAAATTGA GGCCCAAACT ATTGTGGATG GTTTGGCGAT TGGTTTCAAT GTGAATTATT TGTTAGATGC TTTGTCTTCC TTGCGTGGTG ATTTTGTTAA TATTCAGCTA CGCGATTCGA ATTCTTCTGC TTTAATCCGT GAATCTAATA GTGAGAAGTC ACTTCAAGTA GTGATGCCAT TAAGATTATG A
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Protein sequence | MRFRLQRETF LKPLAHVVNV VERRQTRSIL ANLLIKVNED QLSLTGTDLE VEMISKTIIE DAESGEITIP ARKIYEIVRA LPDASQLSVY QSDDKITLQA GRSKFTLATL PANDFPSIDK IEVTERIIIA EVLLKELIER TAFAMAQQDV RYYLNGLLFD LRDTKLRCVA TDGHRLALCE TELEQAKDLK RQIILPRKGV MELQRLLEGS DRQIELEIAR NHIRMKSFDV TFTSKLIDGS FPDYEGVIPI GADREVKVAR EVLRDALQRA AILSNEKYRG VRIEVSPGQL KINAHNPEQE EAQEEIEAQT IVDGLAIGFN VNYLLDALSS LRGDFVNIQL RDSNSSALIR ESNSEKSLQV VMPLRL
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