| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2235 |
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| Symbol | |
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| ID | 6204189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010579 |
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| Strand | + |
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| Start bp | 7447 |
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| End bp | 8817 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641703789 |
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| Product | P-type conjugative transfer protein TrbL |
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| Protein accession | YP_001830941 |
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| Protein GI | 182682743 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATGC TTGCATTGGC GTTATTGCTG TTTGCCGCAC AAGCGCAAGC ACAAGCACCT
GTCGATAGCG TCGGTTTGTT GGACAACATT CTCCGACGTT TCCAACAGGT CACTAATACT
TGGTCTGGCG AGATAATTAG ATACGCGAGC TTGCTCTTTT GGAGCTTATC ACTGCTGAGT
ATGACCTGGA CCTATGGGAT GATGGTTTTA CGTAAGGCTG ACATTCAGGA GTTTCTTGCT
GAGACGATCC GGTTCTTTGC GATAATGGGC TTCTTCTGGT GGCTCCTGAT CAACGCTCCA
GCTATGTCGA CAGCGATCAT CGATTCGCTG CGGCAAATTG CAGCCAACGC TACGGGATTA
GATAACACGC TCTCGCCATC AGGAATTGTC GATATTGGCT TTGACATTAC CTCAAAGGTT
ATTGACGATA GCTCCATCAC GTCGCCTGTT AACTCTGCCG TTGGCATCAT CGCTTCGACT
GTGATTCTTA TTGTGCTGGC TCTCATTGCC GTGAACATGC TACTGCTGCT TGTATCGGGA
TGGCTGCTGT CCTATGGAGC GGTTTTCCTA CTAGGATTCG GTGGTGGTCG GTGGACCTCA
GATATTGCAA TTAGCTACTA CAAGACGGTA ATCGGCCTTG GTATGCAGTT ATTCGCAATG
ATCTTGATTA TTGGCATTGG CAGGTCTTTC ATCGACCAGT ACTACGCGGC TGTCATGGCC
AGTACGATCA CAATAAAGGC TCTTTTGGTT ATGCTAGTGG CGTCTATCGT TTTGCTTTCG
TTAGTCAACA AGATTCCTCC GATGTTTGCC AGCATCGTAG GCGGTGGTGG CGCTACGGCT
GGCATTGGCA ACTTTGGCGC GGGTGCAGCC ATTGCTGCGG CGGCTACAGG AGCTGCTGTA
GCGGCGACGG CCGGCTCTGC TATCGCCGCT GGTGTATCAA GCGCTGGGGG TGGTGTTTCG
GCTCTCAAGG CAGCATTCCA GTCTGCCCAG CAAAACATGG CGAGCGGTGG TGGTTCTGGA
TCAGGTTCAG GCGGAAATTC TGCTGGAGTA TCCTCTGGCG GCAGTAGCAG CTTCATGTCG
GCGATGGGTA CAACTGGACG CTTTGCTGCT GACATGGGAA CGAGTCTTGC CAAAGGTGTT
GGCCAAGTTG TTAAAGACAA GGCTGGAAGC ATGATCGCAT CCGCTAAAGA GCGGGTCGCA
GACACGACCG GCGGCAAGGT TGCATCCGCA ATTCGCAACA ACATAGGTGC AATGTCTGGG
CAAGACGACT TCAAAGGTGA CAGCCTAGCA GGTGCAGCTC AGAGAGGTTC TGAGACGGCC
ATGCATGATG AGGTCGCTGC CTTTGTGAAC AAAGGTAAGC AGCATGAGTA A
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| Protein sequence | MPMLALALLL FAAQAQAQAP VDSVGLLDNI LRRFQQVTNT WSGEIIRYAS LLFWSLSLLS
MTWTYGMMVL RKADIQEFLA ETIRFFAIMG FFWWLLINAP AMSTAIIDSL RQIAANATGL
DNTLSPSGIV DIGFDITSKV IDDSSITSPV NSAVGIIAST VILIVLALIA VNMLLLLVSG
WLLSYGAVFL LGFGGGRWTS DIAISYYKTV IGLGMQLFAM ILIIGIGRSF IDQYYAAVMA
STITIKALLV MLVASIVLLS LVNKIPPMFA SIVGGGGATA GIGNFGAGAA IAAAATGAAV
AATAGSAIAA GVSSAGGGVS ALKAAFQSAQ QNMASGGGSG SGSGGNSAGV SSGGSSSFMS
AMGTTGRFAA DMGTSLAKGV GQVVKDKAGS MIASAKERVA DTTGGKVASA IRNNIGAMSG
QDDFKGDSLA GAAQRGSETA MHDEVAAFVN KGKQHE
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