| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2232 |
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| Symbol | |
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| ID | 6204186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010579 |
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| Strand | + |
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| Start bp | 4980 |
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| End bp | 6380 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641703786 |
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| Product | conjugal transfer protein TrbI |
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| Protein accession | YP_001830938 |
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| Protein GI | 182682740 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATA ACGATCAAAT GTCACCGGAC GCCTCGCCAA ACTCCAAGCC GAGAAGCGGC
GTTCGTCGGG TCAATAACTT ACCGCTCATC ATCGTGATCG TTGTACTTTG CCTGTTTGCT
TTATTGATTG CGAAGGTGGC TCTCAAGCGT ATGAATAATG TCGCAGTGGC CCAGTCGGAT
ACACAAAAAG TGTCGAAGAA GAACATCGAT ACAAGCACGA TGGCGAATGA AGTGCTGAGC
GGCCACGGTC CAGGCATTAT TCCTTCGGCT ATGCCAGAGG TGCCATCGGC TGTCAGCGCG
ACGGCTGGTA TTCCGATTGC GCCGGTCAAC AATCCTGACG CACCACCGAT GCCACCGCAT
CAGCCGGATA GCTTGTCGGC TCCTGTCAAT CCTGATGAAC AACAGCTTCG TATGGCGAAG
CTCCAGCAGT TTCAGGAAGC GATTAAGGCT AAATCCAAGA TCACATTACC CTATGACGGT
AGTGGTTCTC CAAGCACGTC GATGACCTCA CGAGGAGCTA GTGCAACGGC TACCCCACAA
TCACGCGAAG AAATGCTCGC ACAGATTGCG AAGGTGCGAC AGCAAATCGA CGAGAACGCA
GCAGGTGGCG ATCTGACAAG TTCTTATCAA GCACAGTTGG CAAGGATTCG TGCGAGCCTT
GGAAATGGTG ATGGCGGTTC AGAGAGCAGT CCGCACCTTT TGCAGGTCTC TGCATCGTCC
AGCAACAAGG ATTTCTCACA GTTTGCCAAC AATGGGCAAG GCGATCGCTG GAAGCTAGAT
CAAGAGATAC AAGCTCCGCG TTCTAGCTTT GAGATTCGTG CCGGTGGCGT TATTCCTGGT
GTAATGATTA GCGGCGTGAA CTCTGATTTG CCTGGTCAAA TCATGGGACA AGTGGCCCAG
GACGTGTATG ACACGGCAAC GGGAAAATAT TTACTGATCC CCCAGGGGAC ACGCTTAGTG
GGCATGTACA ACAGTAACGT GGCGTATGGG CAAGGTGCGA TCCTTATTGC ATGGCAACGT
CTGGTGTTTC CCGATGGCAA GGCACTGGAC ATCAGTGCGA TGCCTGGTGC GGATAATGCT
GGTTACGCGG GTTTTCGCGA TCACGCCAAT CATCATTACA TGCGCATCTT CGGGTCTGCA
CTGCTGATGT CAGGTGTGAC GGCTGCGTCG TCGTATGCGA CGGATCGAAA CAGAAACAAC
AGTGGCATCT ACAGCCAACC AACCGCCAGT AGTGAGTTGA GTCAGGCACT CGGCCAACAG
CTCGGCAACG TAACGGCGCA GATGATCTCG AAGAATCTGA ACATTGCTCC GACTCTCCAA
ATTCGCCCTG GCTATCGTTT CAACATCATC ATTGTGAAGG ACCTCAATTT CACAAAGCCG
TACAAATCTT TTGATTACTG A
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| Protein sequence | MVDNDQMSPD ASPNSKPRSG VRRVNNLPLI IVIVVLCLFA LLIAKVALKR MNNVAVAQSD
TQKVSKKNID TSTMANEVLS GHGPGIIPSA MPEVPSAVSA TAGIPIAPVN NPDAPPMPPH
QPDSLSAPVN PDEQQLRMAK LQQFQEAIKA KSKITLPYDG SGSPSTSMTS RGASATATPQ
SREEMLAQIA KVRQQIDENA AGGDLTSSYQ AQLARIRASL GNGDGGSESS PHLLQVSASS
SNKDFSQFAN NGQGDRWKLD QEIQAPRSSF EIRAGGVIPG VMISGVNSDL PGQIMGQVAQ
DVYDTATGKY LLIPQGTRLV GMYNSNVAYG QGAILIAWQR LVFPDGKALD ISAMPGADNA
GYAGFRDHAN HHYMRIFGSA LLMSGVTAAS SYATDRNRNN SGIYSQPTAS SELSQALGQQ
LGNVTAQMIS KNLNIAPTLQ IRPGYRFNII IVKDLNFTKP YKSFDY
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