| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2229 |
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| Symbol | |
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| ID | 6204163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010579 |
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| Strand | + |
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| Start bp | 2872 |
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| End bp | 3588 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641703783 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001830935 |
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| Protein GI | 182682737 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.373405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTCA ATCTAAGAAA TCCTTTCGGG AAGAAGGAAA AGCCAGACAC CAACACGGTG
AATCCTTATC TCAATGCTCG ACGTTCGTGG AACAGTCACG TTGGCCAAAT AATGCAACAT
AGCCAGGTAG GTATCTTCGT CGGCTTGCTT GGTATGTTGA TCGGTCTTGC TGCTGTCGGT
GGTATGACCT ACATCGGAAG TCAATCGAAA TTTATTCCAT TGGTGTTCCA GCAGGACGGT
AGCGGCAACA CCATTTCGAT GACACGTCCT GATCGCATTC CCGAGGCTCT GGTAGACGAT
TATCGCACTG CCGTTTCCGA CTTCATTACG AATATTCGTC TCGTAACGCC AGATTCCGGG
TTGCAGAACA AAGCTGTGCT GAAAGCGTAT GGCTATCTCG TACCCAACGA TCCGGCGACG
CTCAAAGCAA ACGAATATCT GAACGCTACG AAAGAAACTA ATCCGTTCAC TCGCGCTGCG
AATGAAATGG TGAGTGTCGA TGTGAAATCT GTTCTCCAGC AGTCTAAAGA CACTTGGCAA
ATTGACTGGC AGGAAACAGT GCGGGGGCGT GACGGTTCTC TCAAGGGAGC ACCGTACATG
ATGCGTGCGC TCGTGACGAT TTATCAAAAC AAGGATACGG AAGTGGAGTC GGAGAAGATG
TTCATCAACC CGCATTTCAT TTTCGTCAAA GACTACAACT GGTCGAAGCA ACTTTGA
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| Protein sequence | MSVNLRNPFG KKEKPDTNTV NPYLNARRSW NSHVGQIMQH SQVGIFVGLL GMLIGLAAVG
GMTYIGSQSK FIPLVFQQDG SGNTISMTRP DRIPEALVDD YRTAVSDFIT NIRLVTPDSG
LQNKAVLKAY GYLVPNDPAT LKANEYLNAT KETNPFTRAA NEMVSVDVKS VLQQSKDTWQ
IDWQETVRGR DGSLKGAPYM MRALVTIYQN KDTEVESEKM FINPHFIFVK DYNWSKQL
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