Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2145 |
Symbol | |
ID | 6203728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2421434 |
End bp | 2423335 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641703659 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_001830815 |
Protein GI | 182682655 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGT CTGTGCCTAG AAATCCCATT GCCCGTTTCT TTATTGGCTT ATGGGGAGCG ATGAATTTTA CCCGCCGCTT AATTCTCAAT TTGGTGTTTT TCGGTTTCTT GTTTTTCTTG TTATTGATGA TGTTAATTGG AATGACGCAC GGCTTGAAAG GCAAGCAGCT CGACGATCGC ACGACTCTAT TGATTGCGCC GCAAGGCACA TTGGTGGAAC AGTTCAGTGC CGATCCGGCC AGTCGTGCAT TAGCCAAAGC GACTGGTGAT AAGAGTGGGC AGGAAGTTCA ACTGCGTGAT CTGATCCGTG TGATTGAGGC TGCGGCTAAG GATAAGAAGA TTGAACGTGT TCTGCTGGAT TTGGACAAGT TGCAGCCATC AGGGTATGCC TCATTGCGTG AGGTCGTTGC TGCGTTACAG AACCTCAAAG ATTCAGGGAA ACAGTTAGTT GCTTTCAGTG AAAGTATGAC TCAGTCGCAG TATCTGCTTG CCGCACAGGC GGATGAGATT TATTTGGATC CAATGGGCAG TGTTTTGCTT GAGGGTTTGG CTCACTACCG TCAGTATTTC CGCAAGGGAT TACAAGAAAA ATTGGGTGTG GATGTTCATC TTTTCCGTGT CGGCGAATAC AAATCCGCGG CTGAGCCTTT TGTTCTTGAT GCGGCCTCAG CCGATGCCAA GGAGGCCGAT TTGTTCTGGA TGAACGATAT ATGGCAACGC TATTTGGCCG ATATCGCTAA GGCACGTAAG CTCGATTCGG CGCACCTCAA TACTATAGTC GAAAGACTGC CGCAGGATAT TGCTGCTAAT CATGGTGATT TGGCCAAGTA TGCATTGGCG CAGAAACTGG TAGATGGCTT GAGAACTCGC GAGCAAGTGA ACCAGTTAAT GATCCAGCGT GGTGTTGCCG ATAAAAAGGC CGATGGTGGT TTCCGTAATG TGGACTTCGG TACTTATTTA AGTTTGCTGG ATGCACAGAG TGCGCTACTA GGCACGTCCT CGCAGATTGC CGTCGTTGTG GCAGCGGGTG AAATAAAAGG AGGTGATCAG CCTGCCGGTT ATATTGGTGG TGAGTCGACC AGTATGCTTT TGCGTAAGGT GCGTGATGAA GACGCGGTCA AAGCGGTGGT GCTTCGTGTA AATTCTCCCG GTGGAGAAGT CTTCGCTTCT GAGCAGATTC GCCGTGAAGT CGTTGCACTG AGGAAGGTTG GCAAGCCGGT CGTGGTGTCG ATGGGTGATA TGGCTGCTTC CGGAGGGTAT TGGATTAGCA TGGATGCTGA TCGCATTTAT GCTGATCCAT CGACGATCAG TGGTTCGATT GGTATCTTCG GCTTGGTACC CAATATCACT CGTACGCTTG ATAAAGTGGG AGTGCACACG GATGGCGTGG GTACGACCCG TTTTGCAGGT GCACTTGATA TCACTCGTGC GCTGGATCCG CAGGTGGGAC AGATATTCCA GAATGTGATC GACAAAGGCT ACGCAGATTT CACAACTAAG GTTGCGCAGG CGCGTCACCG CTCCGTGAAA GAGATTGACA GTATTGCTCG CGGTCGTGTA TGGAGCGGCG CGCAGGCGAA AGAACGTGGT TTGGTCGATG AACTTGGGGG AGTGCGCGAG GCGATTACTG ATGCTGCAAA GCGTGCCAAG CTTGGCGAGG GCCACTACAG TGTGCGTTAT GTTGATAAGG CAGTCAGCCC ATTTATGCAG TTCATCATCA ACATGATGTC CACTCGGATT GGGAACTGGG CATTGGGAGA TTCAGGCTTG GCTCGGGTGC TGCTCACCCG TATTTCTCCG GAAACAGAGG TGCAGTTGCG TTTTGTTGAA GATGCAGTGC GTGAGGCCAA AACGGGCATG CTTCCAGTCA AACCCTTGGT TTACTGTTTC TGTGGACTTT AG
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Protein sequence | MNQSVPRNPI ARFFIGLWGA MNFTRRLILN LVFFGFLFFL LLMMLIGMTH GLKGKQLDDR TTLLIAPQGT LVEQFSADPA SRALAKATGD KSGQEVQLRD LIRVIEAAAK DKKIERVLLD LDKLQPSGYA SLREVVAALQ NLKDSGKQLV AFSESMTQSQ YLLAAQADEI YLDPMGSVLL EGLAHYRQYF RKGLQEKLGV DVHLFRVGEY KSAAEPFVLD AASADAKEAD LFWMNDIWQR YLADIAKARK LDSAHLNTIV ERLPQDIAAN HGDLAKYALA QKLVDGLRTR EQVNQLMIQR GVADKKADGG FRNVDFGTYL SLLDAQSALL GTSSQIAVVV AAGEIKGGDQ PAGYIGGEST SMLLRKVRDE DAVKAVVLRV NSPGGEVFAS EQIRREVVAL RKVGKPVVVS MGDMAASGGY WISMDADRIY ADPSTISGSI GIFGLVPNIT RTLDKVGVHT DGVGTTRFAG ALDITRALDP QVGQIFQNVI DKGYADFTTK VAQARHRSVK EIDSIARGRV WSGAQAKERG LVDELGGVRE AITDAAKRAK LGEGHYSVRY VDKAVSPFMQ FIINMMSTRI GNWALGDSGL ARVLLTRISP ETEVQLRFVE DAVREAKTGM LPVKPLVYCF CGL
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