Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2143 |
Symbol | |
ID | 6202648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2416303 |
End bp | 2418279 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641703657 |
Product | ATP-dependent DNA helicase Rep |
Protein accession | YP_001830813 |
Protein GI | 182682653 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGGCC TCAATTCTCC TCAACGTGCT GCGGTCTTAT ACCGTGAAGG TCCTCTGCTG GTGCTTGCGG GTGCTGGCAG CGGCAAGACG CGTGTGATTG TGGAGAAGAT TGCGTACTTG ATCACCTCAG ATTGTTATCC TGCTAAACGT ATTGCAGCGA TTACATTTAC CAACAAGTCC GCGAAGGAAA TGCGTGAACG TGTGGCGAAG CAGATCAAAA GTAGTCGTGC TGATGGATTG ACGATCTGTA CCTTTCATGC ATTGGGACTG AAGTTTTTGC AGATTGAGCA TGAGGCCGTT GGACTGAAGC CTGGCTTTTC GGTGTTCGAT GCAGATGATG CTGATGCCCA GATCAATGAC CTGTTGCATG GAGCCAAACA GGATGTGATT GATGATACGA AAAGACGGAT ATCCCGTGCT AAGAATGCTG GTTTGTCACC TGAACAAGCA CTTGCTGCTG CACGTACCAC GCGTGACATG GAGGTGGCAA CGTTATATGC ACGCTATCAA GCACGCCTGA TAGCGTTCAA CGCCGTTGAT TTTGATGACT TGATTCGCCT GCCGGTACAG ATCCTTGAAA CGAGTGATCA GGTTGCGATT GCTTGGCGTG AACGGATTGG TTACTTGTTG GTCGACGAGT GTCAGGATAC CAACGATGCA CAATATCGAT TACTAAAGGT GCTGGCCAGT CCGCGTGGCA ACTTCACCTG TGTAGGGGAT GATGATCAGA GTATCTATGC TTGGCGAGGT GCTAATGCTG AGAACTTAAT GCAACTGGAG AGAGATTACC CACAATTGAA AGTCATCAAG TTGGAACAGA ACTACCGTTG TCCTAACCGT GTGCTGCGTG CTGCCAATGC GTTGATTGCA CATAACCCAC ATGCGCATCT GAAGACGTTG TGGAGTGACC AGAAAGACGG TGAGCGCATC CGTATTTGGG AGTGCCGAGA CAGCGAACAT GAGGCTGAAA AGATCGCAGC GGAAATCTCT TATTTGGGGG ATGCCAAGCA GGTACCGTGG AGTGATTTCT GCATCTTGTT CCGAGGTAAC TTTCAATCGC GTCCGCTGGA AAAGGCACTG CAATTATTGC GTATCCCTTA CCACTTGACG GGTGGTACCG CGTTTCTGGA ACGTCAAGAA GTGAAGAACC TGTTGTCTTG GCTACGATTG TTGGTTAACC CTGATGACGA CGCCGCATTT CTCCGTGCAG TGCAGTCACC CAAGCGTGAG GTTGGTTCCA CCTCATTGGC TAAATTGGCT GAACTTGCGG CGACAAAGCA AATGCCGATG TCGCGTGCTG CTGAGTCGCT GGGCGCGTTG CAACAATTAC CGGCGCGCGC AGCCAGTGGC CTGAATAAAT TCACTGATAT CTTGCGTGAG TTGCGCCAGC AAGTATCACG TGTGTCGGCG GCTGAGTTAG TGCGGCGCCT TGCTGAAGTT TCTGGTTTAC TTACCGAATT GCGTGAGCAG TCCAATGATG AAGCGAGTTA CCAACGGCGT AAGCGTAATG TAGAGGAACT GGCCGAATGG TTTGAAGGCG ACCCTTTCGG TGCCAGTGTT GGCGATCTTG TTTCTCAGCT AGCATTGCTA TCACGAAATG ATAAGGACGA TGGTGGTAAC CAGGTGCGCA TGATGACACT GCACGCTTCC AAAGGATTGG AGTTTCGTTA TGTGTTCATC GCTGGTTGCG AAGATGGCGT GCTACCGCAT GAAGTCAGCT TGGAAGAAGG CAATGTGCAA GAGGAGCGGC GCCTATTATA TGTTGGTATC ACCCGAGCCA AAGAGCAGTT GTGGATGAGC TATAGCAAAT GTGCGCGCCG CTTCGGTGAA CGTGTGCGGT TTAAGCCCAG TCGCTTTTTC GATGAACTGC CAGCTGAGGA ATTACAGTGC GATGGTGCTG ATCCTGCGGT TGATGCCGAA CGTAAACAGG AGCGTGCTAA GGCTGGTTTG GCAGCAATTC AGGCGCTATT GGACTGA
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Protein sequence | MHGLNSPQRA AVLYREGPLL VLAGAGSGKT RVIVEKIAYL ITSDCYPAKR IAAITFTNKS AKEMRERVAK QIKSSRADGL TICTFHALGL KFLQIEHEAV GLKPGFSVFD ADDADAQIND LLHGAKQDVI DDTKRRISRA KNAGLSPEQA LAAARTTRDM EVATLYARYQ ARLIAFNAVD FDDLIRLPVQ ILETSDQVAI AWRERIGYLL VDECQDTNDA QYRLLKVLAS PRGNFTCVGD DDQSIYAWRG ANAENLMQLE RDYPQLKVIK LEQNYRCPNR VLRAANALIA HNPHAHLKTL WSDQKDGERI RIWECRDSEH EAEKIAAEIS YLGDAKQVPW SDFCILFRGN FQSRPLEKAL QLLRIPYHLT GGTAFLERQE VKNLLSWLRL LVNPDDDAAF LRAVQSPKRE VGSTSLAKLA ELAATKQMPM SRAAESLGAL QQLPARAASG LNKFTDILRE LRQQVSRVSA AELVRRLAEV SGLLTELREQ SNDEASYQRR KRNVEELAEW FEGDPFGASV GDLVSQLALL SRNDKDDGGN QVRMMTLHAS KGLEFRYVFI AGCEDGVLPH EVSLEEGNVQ EERRLLYVGI TRAKEQLWMS YSKCARRFGE RVRFKPSRFF DELPAEELQC DGADPAVDAE RKQERAKAGL AAIQALLD
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