| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_2069 |
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| Symbol | |
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| ID | 6203429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2324197 |
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| End bp | 2325555 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641703580 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001830741 |
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| Protein GI | 182682581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCC GCTGCCTCGC CTTGGCCGTG ACCACCGCCC TATTTCCCGT CGTTTCACAA
GCGACAAACC TATTACAAGT CTACGAAATG GCACGCGCTG CTGACCCTCA ATTAAGCGCA
GCCGAATCCA CTCGGCTATA CAGCGTTGAA GGGCAAGTTC AGGCACGTGC AGCGCTGCTG
CCGCAGATGA GCGGCACAGC CACCCTGGCA CGTAGCCGCA CTGAATACGA CGGTATCAGC
GGATCAGCCA TCAGTAAGAA CCGCCAATAC AGCATCAACG GTAGCCAAAC TCTGTTCAAC
TGGAGCCAGT TTTCCAACCT TCGATCACAA CGCGAGATCG CCAAAGCCGC CGATTTCACA
CTGGAATCGG CCAAACAAAA CTTGATTGTG CGCAGCTCAG CTGCATACTT CAGCGTCTTG
ATCGGGATTG AATCGCTGAT CGCCGCCGAA GCGAATGAAG CATCAGCTAA GCGCCAGTTT
GATTACGCAC AGAAACGTCT TGAGGTTGGC CTATCACCCA TCACAGACCT TCATGAAGCA
CGTGCCAGCT ACGACCAAGC CCGTGCAGAC ACCATCACTG CACGCAACAC ACTGCAAGAC
TACTACCAAG CATTGGCAGA GATCACTGGA CAACCCGTCA CTGACCTGCG TGGCCTCCCT
GAAGACTTCC GACCAGAAGT GCCAGCGAAA TTCAGTAACA TTGACCAGCT GGTCACTGAA
GCCATCTCCA ACAATCCGTC GCTAAAAGCG CAGCAATTGC AAGTCAATGC CGCGGAATCC
AGCATCTCAG CCGCACGTGG CGAGCACTAC CCAACACTGT CACTGAGTGG AAGCCTGGGG
AAAAGTAAAG CCTGGGGATC CTCCAGCGGC GCAATGAGCG CACTCATTCC TGACAGGAAC
CAACCGATTA GCGACACCAA CAACTTACAA TTAACGCTGT CAATACCACT CTTTGCAGGT
GGTGCAACCC AATCCAGGGT CCGTCAGGCA ATCGCACAAC GCGACATCCA ACAGGATAAC
TACGAGCAGA ATAAGCGCAC GCTAAACCGT AATACCCGCA ATGCCTACCA AAATATGATT
GCAGGCATCA GCGAGGTCGA AGCGCGTCGC TTGGCAGTCG TCTCAGCACA AGCGGCCCTA
GATGCTTCTC AAGTCGGCCT GGAAGTCGGC ACCCGAACCC TGCTGGACGT GGTACAGAAC
CAACGTATCC TTTTCTCGGT ACGGCAAGCC TATGTACAAG CACGCTACAA CTTCCTACAA
AACCGTCTAC TACTTTCCCA GAACAGCGGC ACCCTGAGCA TTGAGGATGT ACAAGAGATC
AATCAATTGC TGACGGCTGA TTCCGAGAGA AAACTGTAA
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| Protein sequence | MIRRCLALAV TTALFPVVSQ ATNLLQVYEM ARAADPQLSA AESTRLYSVE GQVQARAALL
PQMSGTATLA RSRTEYDGIS GSAISKNRQY SINGSQTLFN WSQFSNLRSQ REIAKAADFT
LESAKQNLIV RSSAAYFSVL IGIESLIAAE ANEASAKRQF DYAQKRLEVG LSPITDLHEA
RASYDQARAD TITARNTLQD YYQALAEITG QPVTDLRGLP EDFRPEVPAK FSNIDQLVTE
AISNNPSLKA QQLQVNAAES SISAARGEHY PTLSLSGSLG KSKAWGSSSG AMSALIPDRN
QPISDTNNLQ LTLSIPLFAG GATQSRVRQA IAQRDIQQDN YEQNKRTLNR NTRNAYQNMI
AGISEVEARR LAVVSAQAAL DASQVGLEVG TRTLLDVVQN QRILFSVRQA YVQARYNFLQ
NRLLLSQNSG TLSIEDVQEI NQLLTADSER KL
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