Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_2034 |
Symbol | |
ID | 6203381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2275635 |
End bp | 2277368 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641703544 |
Product | type IV-A pilus assembly ATPase PilB |
Protein accession | YP_001830706 |
Protein GI | 182682546 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.226289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAC CTCATTCAGC CAATCTTGTC GGCATCACCG GTATTGCCCG TCGCCTGGTC CAGGATGGCA GCATTGAGGA AGCCACTGCA CGCACTGCTC AAAATCAGGC AATGGCCGCA AAAGTGCCTT TACCACAGTG GTTGATCGAT AAAAAACTAG TGAGTGCAGC AAAATTGGCC GCGGCCAATG CACTTGAGTT CGGGATGCCG CTACTGGATG TGTCCGCATT CGACCACAAT CACAATGCAA TGAACTTGGT CGACGAAGAA TTACTGCAAA AGCATCGAGT GTTGCCATTA TTTAAACGCG GTAATCGACT GTTCGTCGGG ATCAGCAATC CAACTCAAAC ACAGGCCCTG GACGACATCA AATTCCACAC CAATCTGGTC GTGGAACCGA TTCTGGTCGA CGAAGACCAG ATACGGCGCA CACTTGAACA ATGGCAATCT AGGAGCGGCG CGCTCAGCTC CGCATTGGAT GAAGAGGATA ACGGCATTGA AGGGCTGGAT ATCGGCGGCG GAGACGACGA CGGGGCCAGT GGCGATACAG GGATTGATGC CAAGAGCGAT GACACACCTG TCGTCAAATT CGTCAACAAA GTGCTGATTG ATGCCATCCG ACGCGGCGCA TCAGACATCC ACTTTGAACC ATACGAAGAA GATTACCGCG TCCGTTTCCG GATTGATGGT CTGCTGAAGG CTGTGGCAAA AGCACCGAAC AAGTTGAATC AGCGTATCGC CGCACGCTTG AAAGTCATGT CGCAACTGGA TATCGCGGAA AAACGCGTCC CTCAAGACGG ACGTATCAAG CTTAATCTGT CGAAAACCAA GCAAGTCGAT TTCCGCGTCA GCACCTTGCC AACGCTGTTC GGCGAGAAAG TGGTACTGCG TATCTTGGAT GGCAGCGCGG CAAAGCTGGG TATCGACAAA CTCGGTTACG AAGCTGACCA ACAAACGCTT TTTATGGAAG CAATCCACAA ACCCTATGGA ATGGTACTGG TCACTGGTCC GACCGGTTCG GGCAAGACAG TCTCACTTTA CACTGCGTTA GGCATCCTCA ATGACGAAAC ACGCAATATC TCCACAGCCG AAGATCCTGT AGAAATCCGG CTGCCGGGTG TCAATCAGGT ACAACAAAAC AACAAGCGCG GTATGACGTT TGCCGCAGCA TTACGTTCGT TTCTGCGCCA AGACCCGGAT GTGATCATGG TCGGCGAAAT CCGTGATCTG GAAACCGCTG AAATCGCCAT CAAAGCCGCA CAGACCGGCC ACATGGTGCT CTCCACCCTA CATACCAACG ATGCACCGCA AACCATCGCA CGCCTCATGA ACATGGGGAT TGCACCATAC AACATCACTT CATCCGTGAC CTTAGTGATT GCACAGCGAT TGGCACGGAG ATTGTGCAAC AAGTGCAAGC GCCCGGCTCA ATTGCCGACA AACGCATTAC TGGCCGAAGG ATTCACTCAA GAACAAATTG ATGCGGGGCT GGAATTATAC GAGCCTGTCG GTTGCGACGA ATGCACTGAA GGCTACAAAG GCCGCACAGG TATTTATCAA GTGATGCCAA TTACCGAAGG GATTTCCTCG ATCATTTTAG CCGGCGGTAA TGCCTTACAA ATCGCCGAAG AGGCACAGCG CATCGGCATC AACGACCTAC GCCAATCGGC GCTACTCAAA GTCGCTCAGG GCATCACCGG GCTGGCTGAA ATTAATCGAG TCACCAAAGA TTAG
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Protein sequence | MNTPHSANLV GITGIARRLV QDGSIEEATA RTAQNQAMAA KVPLPQWLID KKLVSAAKLA AANALEFGMP LLDVSAFDHN HNAMNLVDEE LLQKHRVLPL FKRGNRLFVG ISNPTQTQAL DDIKFHTNLV VEPILVDEDQ IRRTLEQWQS RSGALSSALD EEDNGIEGLD IGGGDDDGAS GDTGIDAKSD DTPVVKFVNK VLIDAIRRGA SDIHFEPYEE DYRVRFRIDG LLKAVAKAPN KLNQRIAARL KVMSQLDIAE KRVPQDGRIK LNLSKTKQVD FRVSTLPTLF GEKVVLRILD GSAAKLGIDK LGYEADQQTL FMEAIHKPYG MVLVTGPTGS GKTVSLYTAL GILNDETRNI STAEDPVEIR LPGVNQVQQN NKRGMTFAAA LRSFLRQDPD VIMVGEIRDL ETAEIAIKAA QTGHMVLSTL HTNDAPQTIA RLMNMGIAPY NITSSVTLVI AQRLARRLCN KCKRPAQLPT NALLAEGFTQ EQIDAGLELY EPVGCDECTE GYKGRTGIYQ VMPITEGISS IILAGGNALQ IAEEAQRIGI NDLRQSALLK VAQGITGLAE INRVTKD
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