Gene XfasM23_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_2034 
Symbol 
ID6203381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp2275635 
End bp2277368 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content52% 
IMG OID641703544 
Producttype IV-A pilus assembly ATPase PilB 
Protein accessionYP_001830706 
Protein GI182682546 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02538] type IV-A pilus assembly ATPase PilB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.226289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC CTCATTCAGC CAATCTTGTC GGCATCACCG GTATTGCCCG TCGCCTGGTC 
CAGGATGGCA GCATTGAGGA AGCCACTGCA CGCACTGCTC AAAATCAGGC AATGGCCGCA
AAAGTGCCTT TACCACAGTG GTTGATCGAT AAAAAACTAG TGAGTGCAGC AAAATTGGCC
GCGGCCAATG CACTTGAGTT CGGGATGCCG CTACTGGATG TGTCCGCATT CGACCACAAT
CACAATGCAA TGAACTTGGT CGACGAAGAA TTACTGCAAA AGCATCGAGT GTTGCCATTA
TTTAAACGCG GTAATCGACT GTTCGTCGGG ATCAGCAATC CAACTCAAAC ACAGGCCCTG
GACGACATCA AATTCCACAC CAATCTGGTC GTGGAACCGA TTCTGGTCGA CGAAGACCAG
ATACGGCGCA CACTTGAACA ATGGCAATCT AGGAGCGGCG CGCTCAGCTC CGCATTGGAT
GAAGAGGATA ACGGCATTGA AGGGCTGGAT ATCGGCGGCG GAGACGACGA CGGGGCCAGT
GGCGATACAG GGATTGATGC CAAGAGCGAT GACACACCTG TCGTCAAATT CGTCAACAAA
GTGCTGATTG ATGCCATCCG ACGCGGCGCA TCAGACATCC ACTTTGAACC ATACGAAGAA
GATTACCGCG TCCGTTTCCG GATTGATGGT CTGCTGAAGG CTGTGGCAAA AGCACCGAAC
AAGTTGAATC AGCGTATCGC CGCACGCTTG AAAGTCATGT CGCAACTGGA TATCGCGGAA
AAACGCGTCC CTCAAGACGG ACGTATCAAG CTTAATCTGT CGAAAACCAA GCAAGTCGAT
TTCCGCGTCA GCACCTTGCC AACGCTGTTC GGCGAGAAAG TGGTACTGCG TATCTTGGAT
GGCAGCGCGG CAAAGCTGGG TATCGACAAA CTCGGTTACG AAGCTGACCA ACAAACGCTT
TTTATGGAAG CAATCCACAA ACCCTATGGA ATGGTACTGG TCACTGGTCC GACCGGTTCG
GGCAAGACAG TCTCACTTTA CACTGCGTTA GGCATCCTCA ATGACGAAAC ACGCAATATC
TCCACAGCCG AAGATCCTGT AGAAATCCGG CTGCCGGGTG TCAATCAGGT ACAACAAAAC
AACAAGCGCG GTATGACGTT TGCCGCAGCA TTACGTTCGT TTCTGCGCCA AGACCCGGAT
GTGATCATGG TCGGCGAAAT CCGTGATCTG GAAACCGCTG AAATCGCCAT CAAAGCCGCA
CAGACCGGCC ACATGGTGCT CTCCACCCTA CATACCAACG ATGCACCGCA AACCATCGCA
CGCCTCATGA ACATGGGGAT TGCACCATAC AACATCACTT CATCCGTGAC CTTAGTGATT
GCACAGCGAT TGGCACGGAG ATTGTGCAAC AAGTGCAAGC GCCCGGCTCA ATTGCCGACA
AACGCATTAC TGGCCGAAGG ATTCACTCAA GAACAAATTG ATGCGGGGCT GGAATTATAC
GAGCCTGTCG GTTGCGACGA ATGCACTGAA GGCTACAAAG GCCGCACAGG TATTTATCAA
GTGATGCCAA TTACCGAAGG GATTTCCTCG ATCATTTTAG CCGGCGGTAA TGCCTTACAA
ATCGCCGAAG AGGCACAGCG CATCGGCATC AACGACCTAC GCCAATCGGC GCTACTCAAA
GTCGCTCAGG GCATCACCGG GCTGGCTGAA ATTAATCGAG TCACCAAAGA TTAG
 
Protein sequence
MNTPHSANLV GITGIARRLV QDGSIEEATA RTAQNQAMAA KVPLPQWLID KKLVSAAKLA 
AANALEFGMP LLDVSAFDHN HNAMNLVDEE LLQKHRVLPL FKRGNRLFVG ISNPTQTQAL
DDIKFHTNLV VEPILVDEDQ IRRTLEQWQS RSGALSSALD EEDNGIEGLD IGGGDDDGAS
GDTGIDAKSD DTPVVKFVNK VLIDAIRRGA SDIHFEPYEE DYRVRFRIDG LLKAVAKAPN
KLNQRIAARL KVMSQLDIAE KRVPQDGRIK LNLSKTKQVD FRVSTLPTLF GEKVVLRILD
GSAAKLGIDK LGYEADQQTL FMEAIHKPYG MVLVTGPTGS GKTVSLYTAL GILNDETRNI
STAEDPVEIR LPGVNQVQQN NKRGMTFAAA LRSFLRQDPD VIMVGEIRDL ETAEIAIKAA
QTGHMVLSTL HTNDAPQTIA RLMNMGIAPY NITSSVTLVI AQRLARRLCN KCKRPAQLPT
NALLAEGFTQ EQIDAGLELY EPVGCDECTE GYKGRTGIYQ VMPITEGISS IILAGGNALQ
IAEEAQRIGI NDLRQSALLK VAQGITGLAE INRVTKD