Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1987 |
Symbol | |
ID | 6203340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2226592 |
End bp | 2228958 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641703497 |
Product | membrane protein |
Protein accession | YP_001830660 |
Protein GI | 182682500 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTGATT GGATCTCTCG GTGTCGTATC GGTATTGCTG TGTTGTGGTT GTTGTTGTTA GTCGGTCTGG GCTGGTGGCT TGCGGGTCGG CTGCAACTCA CGGGTGATCT GCGTCAGTTT ATGCCTGAGG CACAGACTCC CGCACAAAAG TTGTTACTTG AGGAGCTGGG TGAGGGGCCG GGTTCACGGT TGTTGTTGAT GTCGTTACGT GGGAGTGATC CAGCCATTTT GGCGCGGCAA TCGCAGGCAT TACGGGAAGT GTTGGCAGGG CAGCCTCAGG TGTTTGAGTT GGTTGCTAAT GGTGCGCATG TTGGGCTGGA GGCAATTCCG CCCCGATTAT TGCCATACCG CTATCTGTTT AGTGACAGTT TTGATGCTGC GCCGCTGGAT GTTGGGTATC TCAAGCAGGC GTTGCAGATG CGGGTACAGG ATTTGGGGTC TCCAGCCGCG CGTGTGGTTG AGCCGCTGTT GCCTCGGGAT CCAACGTTGG AAGTGTTGCA TGTGGCTGAG CGTTTGCAGC CGTTAGCGGC ACCTGCAATG CGTGATGGGG TTTGGTTTGA TCGTGCTGGA CGGCGTGCGT TATTGCTGGC GCAGACGCAT GCTGCTGGTT TTGATCCGAC GGGCCAGCAG CGCGCTTACG ATGCGGTGCA GGCGGCGTTT ACTCGGGTGT CGGTGAATAC GGCAACGCAG TTGGAACTCA CGGGACCTGG TGCGTTTGCG GTGGAGATTG CTGCAAAGAC TCAAGGGGAG GCGCAGTGGA TCGGGATGTT GGATACGGTA GGACTGATTG TGCTGTTGCT GTTGGCGTAT CGCAGTTGGA AGGTGCCGTT GTTGGGGGTG TTACCTCTTG CCAGTGCTGG TCTGGCTGGT TTGGTTGCGG TGGCATTGCT GTTTGATCGT GTGCATGGCA TCACGGTGGC GTTTGGTTTT ACCTTGATTG GTGTGGTGCA GGATTATCCG ATTCACTTAT TTAGCCATCA ACGGCCGGGG CTGGACCCGC GGGAAAATGC GCGCCATTTG TGGCCGGCTT TGGCGACGGG TGTTGTTTCT ACCTGTATTG CTTACGTTAC GTTTCTATTT TCAGGGGTGG ATGGGCTACG TCAGCTTGCA ACTTTCACGA TTGCAGGGTT GTTGGTCGCG GCAGTGACCA CGCGTTGGTT GTTGCCGGGG TTGATTGATC CTGCGCCGCG TGATCCTGCC GATTCGGTCG TGCTCGCGCG GTTATGGCAG TGGACCGCGG GGGTGCGGTG TCCGCATTGG TCGCTAGCAT TATTGAGTGT GGCCGCAGTC GCTGCGGTGC TGCTGGTGCC TGGTCCGTTC TGGGAGAATG ATCTGTCTAA GTTGACTCCG GTACCGGTTG CTGCGTTGTT GCGTGATATG CGCTTGCGTC AGGAGTTGGG GGCGCCGGAT GTGCGCTATG TGCTGGCACT GCATGCGGTT TCGGCCGAGC AGGCGTTGCA AGCTGCTGAG GCGTTGCGCC CACGTCTGGA TGGTGCGGTT GCCCAGGGTA TTGTTGCCGG TTACGACATG GCGGCGCGTT ATTTGCCTAG CATCCAGACG CAGCGTCGGC GTCAACAGGC GTTACCCCCG CCGGAGCAAG TGCGCCGTTT GATCGCAGAG GCTGTGATCG CTTCGGGGTT TCGTGCTGAT GTATTTGAGC CATTTCAGGC GGATGTGGAG ATGGCACGGC AGGCACCGCC AATGACGATG CAGATGTTGG GAGGGACTGC GTTGGCGATG CCGGTCAGTG GTTTGTTGTT GGTGGGTACT GACGGTGTCA CCGCGCTGGT GTCGCTGATT GGTTTGCATG ATCCGCAGGC GCTCGCTGTC GTGGTAGGTG GTAGTGGTGC ACAGTTGATG GATTTGAAGG AGGCGTCTGA GTCACTGGTT GTGGCTTACC GTGGTCGTGT GCTGGGGGCG TTGGGTGTGG CTGGGTTTCT GTTGGTTGGC ACGGTGGCTT TGGCATTGCG TCAGTGGCGA CGGATGGTGC GTGTGCTCTT GCCTATGGCG ATGACAACGT TATGGATTGT GGCATTGCAA CGCATCTGTG GGGTGGAGTT GAATTTGTTT CACCTGATTG CGTTGATTCT TGCGGCTGGG TTGGGCCTGG ACTATGCGTT GTTCTTTGAA CACGCCGGTG ATCATCGCGC CGAGCAATTG CGCACGTTGC ATGCGTTGTT GGTGTGCAGT GTGATGACGT TGGTGGTGTT CGCTTTGTTG GCTGTCTCAA GTATTCCGGT GCTGAGTGCG ATTGGGAGTA CGGTGGCTCT GGGTGTGCTG CTTAACTTTG TTCTTGCGTT GTTGATCTCG CGTGTTCCGG TGTTGGAGAG GATTGCTGGG AGTGATGCTC TTGTCGCAGG GGGGTGA
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Protein sequence | MGDWISRCRI GIAVLWLLLL VGLGWWLAGR LQLTGDLRQF MPEAQTPAQK LLLEELGEGP GSRLLLMSLR GSDPAILARQ SQALREVLAG QPQVFELVAN GAHVGLEAIP PRLLPYRYLF SDSFDAAPLD VGYLKQALQM RVQDLGSPAA RVVEPLLPRD PTLEVLHVAE RLQPLAAPAM RDGVWFDRAG RRALLLAQTH AAGFDPTGQQ RAYDAVQAAF TRVSVNTATQ LELTGPGAFA VEIAAKTQGE AQWIGMLDTV GLIVLLLLAY RSWKVPLLGV LPLASAGLAG LVAVALLFDR VHGITVAFGF TLIGVVQDYP IHLFSHQRPG LDPRENARHL WPALATGVVS TCIAYVTFLF SGVDGLRQLA TFTIAGLLVA AVTTRWLLPG LIDPAPRDPA DSVVLARLWQ WTAGVRCPHW SLALLSVAAV AAVLLVPGPF WENDLSKLTP VPVAALLRDM RLRQELGAPD VRYVLALHAV SAEQALQAAE ALRPRLDGAV AQGIVAGYDM AARYLPSIQT QRRRQQALPP PEQVRRLIAE AVIASGFRAD VFEPFQADVE MARQAPPMTM QMLGGTALAM PVSGLLLVGT DGVTALVSLI GLHDPQALAV VVGGSGAQLM DLKEASESLV VAYRGRVLGA LGVAGFLLVG TVALALRQWR RMVRVLLPMA MTTLWIVALQ RICGVELNLF HLIALILAAG LGLDYALFFE HAGDHRAEQL RTLHALLVCS VMTLVVFALL AVSSIPVLSA IGSTVALGVL LNFVLALLIS RVPVLERIAG SDALVAGG
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