| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1985 |
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| Symbol | |
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| ID | 6203338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2224015 |
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| End bp | 2225808 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641703494 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001830658 |
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| Protein GI | 182682498 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCA ATTTCACACG CTCCCTCCTC GCCTTTGCCA TCACGTTGAC AACCACACAG
GGCATCGCGA AACCAGCCTT TCAACAAACC ATCTTTTTCG GCGACAGCCT GAGTGACAGC
GGCTACTACC GCCCGCTCCT ACCGAACGAA ATACAAGCCA TCACCGGCAA ATTCACCACC
AACCCCGGCT GGGTCTGGTC TGAATACGTT GCCAGCTATT ATGGAAGCAA TGCCTCCCCC
AATGGCAACA GCCAAAGCGG CAACAATTAC GCCGCTGGTG GCGCACACAT AAATGAACCT
TCAATCAGCA TATTGGGCGA AGCACCATCA CTAACATCTC AAACGAACGC CTATCTCAGT
GCTCATGGGG GCAAGGCTGA TCCAAGCGCG CTATACACCC TCTGGGGTGG CGCTAACGAC
CTGCTCGACA CGTTAACAAC TCCAGAACAA ATACACACCA TCATCGGCAA TGCAACCACC
GCAGAAATAA GCCTGGTGAG CACATTGAAA AATGCTGGCG CACATTACAT CCTAGTCGCA
GCAATCCCTG ATCTTGGTTT GGCACCTCGC GCCCGAAACA CAGGGACCAC CGCGCAAAGC
ACTGCTGCGG CCACCGCCTA TAACACAACA CTATTCACTG CCCTGAAATC GGCAGGGTTG
CAGGTCATCC CGATCGACAC CTTCCACTTA TTACAGGAAT TAATCACCTC ACCGGCAACC
TACGGCTTCA GCAACACCAC CGACACGGCA TGCACCCTAC AATTGCCACT GTGCAACCCC
ACGACCCTGG TCGACGCAAA TGCACCCAAC ACCTATGCAT TCGCCGATGA CATCCACCCA
ACCACCGCAG CACACCACAT GTTGGGCCAG TACGCGATTT CAATCTTGGA AGCGCCACGG
CTCCAGCAAG TGCTGACACG CTCGGCTCAA GGGATCGCCC GCGCCCGCGC CTACCAAGTT
GCCTGGCATC TGGACGGCAC ACCGCAGCAG GATGGCCTGC ACTGGTGGGG CAGCATGCGC
AGCGACTCAC AGCGCAATGA CAGTAACGAC CTGTACAAAA GCGTTGCACC GGCCGGCCTC
TTCGGATTTG ACTGGCACAG CGGCCAAATC GTGTCCGGTG GCTTTATCGG CTACGGACGT
ATGCATGCCG ACTTCAGCAA TGGAAACGGC ACCTTCAAGC AAAAAGACAC CACCTTGGGC
GGCTTTTCAG GCTGGTATAC CGGTCCCGTC TGGGTCAATG CCCAAATCAG TTACACCTTG
CTGAACTACG ACATCAAACG CGAAGTACAA CTCGGTCCAG CCACACGGAT ACACCGTGGT
TCCCCCAATG GCAGCAACCT GACCGTTGCA CTGAATGCCA GTTACGAGAT GGGCGAAGGT
CGGCTGCGCT ATGGCTCAGT GGCTGGACTG ACCTGGCAAA AAACCAAATT GGAAAGCTAC
ACCGAACAAA ACGCCAGCAG CACCGCGCTG GGTTATGCCG ATCAGCAACT CAACTCACTG
CTTGGGCGCG TCGGCTTGCA GATGCGACTG GAAGGAAACG TCGTCACCCC GTACTTACAG
GTGACCTACG ATCACGAATT CAAGAAACAA CAAAACCAAG CCAATGCATG GCTGCAAACC
ATGCCAGAAG CGGGTATCTA TTCCGTGCCG GGACTGACAT TCAATCGCAA CTACGCCAGC
ATCGTACTCG GTGCACGCAC CAAAATTGGA CATCTACAGA GCAACGTTGG CCTCACCACC
AGTACAGAGA AGAACGCACG CGATGTCACG TTATTCGTCA ACGGCAATTT TTAA
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| Protein sequence | MTSNFTRSLL AFAITLTTTQ GIAKPAFQQT IFFGDSLSDS GYYRPLLPNE IQAITGKFTT
NPGWVWSEYV ASYYGSNASP NGNSQSGNNY AAGGAHINEP SISILGEAPS LTSQTNAYLS
AHGGKADPSA LYTLWGGAND LLDTLTTPEQ IHTIIGNATT AEISLVSTLK NAGAHYILVA
AIPDLGLAPR ARNTGTTAQS TAAATAYNTT LFTALKSAGL QVIPIDTFHL LQELITSPAT
YGFSNTTDTA CTLQLPLCNP TTLVDANAPN TYAFADDIHP TTAAHHMLGQ YAISILEAPR
LQQVLTRSAQ GIARARAYQV AWHLDGTPQQ DGLHWWGSMR SDSQRNDSND LYKSVAPAGL
FGFDWHSGQI VSGGFIGYGR MHADFSNGNG TFKQKDTTLG GFSGWYTGPV WVNAQISYTL
LNYDIKREVQ LGPATRIHRG SPNGSNLTVA LNASYEMGEG RLRYGSVAGL TWQKTKLESY
TEQNASSTAL GYADQQLNSL LGRVGLQMRL EGNVVTPYLQ VTYDHEFKKQ QNQANAWLQT
MPEAGIYSVP GLTFNRNYAS IVLGARTKIG HLQSNVGLTT STEKNARDVT LFVNGNF
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