Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1958 |
Symbol | |
ID | 6203305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 2194796 |
End bp | 2196550 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641703467 |
Product | rare lipoprotein A |
Protein accession | YP_001830631 |
Protein GI | 182682471 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4305] Endoglucanase C-terminal domain/subunit and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCT TGGCAATCTT ATTTTGGCTT GCAACATCCG GTTGCGTGGC CTCCGCCATG TACGGTGGAA CGGTGGGTGC ACAAAATGCA GTGTCTGATA CTCACTTTGT TGAACCACTC CGCGGCGTTA ACTGGCGTGG TTTGGAAACG GCGCAGCACC TGCCGCAAGG TTTAAATCAA CGTCCCTGGC GTGAAGTACT CGACCAAATG CAGAGCCTAG GCATTAACGC AATACGCCTG CCCCTGTGCT CGGACACCCT ACATGGCGCC ATGCCTACCA ATCTGGATCT AGTGCGTAAT CCAGATCTCA AAGGACGTAC CGCATTGCAG ATTGCCGACG CAATCATGGA TGAAGCTGGG AAACGTGGGA TGCGGGTCCT CCTGGCGTAT CACGGCGTGG AGTGTCCTAC CGACAGAAAC CCATTATTGC GCAGCGTAGA TGAATCAGAG CACCAATGGA TCAGCGATGT GCAATTCATC ACCTCGCATT ATCGTGCTCA ACAAAAAGTA GTGATGGGCG TGGACTTGGC CGACATGGCA AACCATCGCC CCTTTCAGAG CGGTGGTGAT AGCGCGCCTG ATTGGAATCC TGTCGTCGAG CGTGCCGCCG CTGCCATTCT GGCGATGAAT CCCGACTGGT TGATTGGTGT GCAGCTTGTT GGCCTGAATC CCCCCTGCTT GGATGCCTCC GCTCCCATCT CCGATGACAA CATAAAATCG CAGCACTGTG TCCAATTACG CATTCCTGCT CGGAGCCTCT TGCTCATGCC GCGCTTCGCG GGCACTGACA TGGATACTGA AGCTGCCCTT GGCGCATTTT CTGGAAAACA AACCGTGTTA CCCAACTCTC TGGATGCCAC GGATGCCGAG CAGCTCGCCC ATCGGATTGA TGCACTGCTG GCATTTGGTA TACGCCAAGG CTTTTATGGA TCTTGGATGA CCTCAGCACA GATGCCATTT GGCCTGCTCG ATAACGACGG CCGTACCCCA CGTACCTCAT TGATTGCACA ACTACATCGT TGGTGGGGTG TTAGCCGTGT CGATGTTGCC AGTGAGAATG CTACGACGAA GAATCAAACA ACGACCGATA CCAATGGATG TGTTGCTGGT GATAACAGCG TGCCACTCAA TGGTTGGGAC ACCTCTTTCA GTGGTGTCGC CACCTATACC TATACGGGTT ACAAAGGCGG CGCATTGATG CTGGATCCGA TTCAGTCCCA TGTGCAAATC ACTGCACTGA ATCCTACTCA ACTCAATTTG GGGGGGATTC CCGCTGCGAT GGCCGGTGCT TATTTGCGTG TGCAGGGTCC GAAGGGAAGC ACAACCGTCT ACGTGACGGA CCTCTATCCC ACCGGATCTT CCGGGGGATT AGATCTTTCG CCGAATGCCT TTGCCAGTAT CGGCAATATG GCTCAAGGGC GTATCCCCGT GCAATGGAAG GTCGTCTCAG CACCTGTGAG TGGCAACTTG ATCTATCGGG TAAAAAAGGG AAGCTCGGGA TGGTGGGCAG CGATCCAAGT ACGTGAACAT CGGTATCCAG TCCTCAAACT TGAAATCTGT CAGGATGGCA CCTGGTTGAA TTTGCCAAAG AGAAATTACA ACTACTTTGT TGGTACCCGA CTGGGTAACC AACCCTTGTC AATGCGCATG ACAGATATTC GTGGTCAGAC CTTGATTGAT ACGCTTCCCG CCTTGCCCAA TAAGGCTTCC TCAAAAGCAT ATTCTGTGAA TGGAAATGTC CAGTTTTCCG AATAA
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Protein sequence | MRRLAILFWL ATSGCVASAM YGGTVGAQNA VSDTHFVEPL RGVNWRGLET AQHLPQGLNQ RPWREVLDQM QSLGINAIRL PLCSDTLHGA MPTNLDLVRN PDLKGRTALQ IADAIMDEAG KRGMRVLLAY HGVECPTDRN PLLRSVDESE HQWISDVQFI TSHYRAQQKV VMGVDLADMA NHRPFQSGGD SAPDWNPVVE RAAAAILAMN PDWLIGVQLV GLNPPCLDAS APISDDNIKS QHCVQLRIPA RSLLLMPRFA GTDMDTEAAL GAFSGKQTVL PNSLDATDAE QLAHRIDALL AFGIRQGFYG SWMTSAQMPF GLLDNDGRTP RTSLIAQLHR WWGVSRVDVA SENATTKNQT TTDTNGCVAG DNSVPLNGWD TSFSGVATYT YTGYKGGALM LDPIQSHVQI TALNPTQLNL GGIPAAMAGA YLRVQGPKGS TTVYVTDLYP TGSSGGLDLS PNAFASIGNM AQGRIPVQWK VVSAPVSGNL IYRVKKGSSG WWAAIQVREH RYPVLKLEIC QDGTWLNLPK RNYNYFVGTR LGNQPLSMRM TDIRGQTLID TLPALPNKAS SKAYSVNGNV QFSE
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