| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1928 |
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| Symbol | |
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| ID | 6203247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 2150469 |
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| End bp | 2153144 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641703438 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001830602 |
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| Protein GI | 182682442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000726308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC ACCGACACAT CTGCCTCCGC CTGGCCGCCT TCCCCCTACT CGCCTTTGGC
ACCCTCCTCA CTGCCTCGGC CGCCCCACCC AGCAGCCACC CCCTCAGCAA CTGGCACCTG
CGCCTCGCCC CTGACCAACC CACAACACCC ACCCTCCCCT TAAAAACAAC CACCTGGCTG
CCCGCACACG TCCCCGGCAC CGTACAAACC GACCTCATCG CCGCTGGCAT CGTCCCCGAC
CCCTTCTACC GTGACCAAGA AGCACAGATT CAATGGATCG GCCTCAACGA CTGGCAATAC
CAAACCCATT TCCACATCGA CACCGCCACA CTGACCCGCC AACATATCGA ACTCGTCTTC
AACGGCATCG ACACCCTCGC CACCGTCACC CTCAACGGCA CCCCCCTGCT CCATCCCAAC
AACATGTTTC GGCGCTGGCG CGTGGACGCA AAACCACTGC TCAAACGCGG TGAAAATATC
CTGGAAATAA CCCTCTACTC ACCCATCAAA AAGATTCAAC CCTGGCTCAC ACAACAACCC
TATGCCCTCC CCGGCGCCTA CGACTCCGCC TTCCACGACG AACCAACCGC ACGCCACAGC
GCCACCTACG TACGCAAAGC ACCCTACCAA TTCGGCTGGG ACTGGGGACC ACGCATCGTC
ACCACCGGCC TCTGGAAAAA CGTCACCCTG GACACCTGGG ACACCACCCG CATCAATGAC
CTGCACATCG CCCAACAACG CATCGACGCC GACACCGCAC ACCTAGAAGC ACAACTCACC
CTAGATGCAA CGCATCGTGG CCCCGCCCAC ATCACCCTGC AAATCTTTGA CCCAGACGGC
CGCCCAATCG CCCAATACCG CCAACACCCC ACCCTCGACA CCGGCACCAA CCACATCCAC
CTCCCCGTGC GGATTGCCCA ACCGCGGCGC TGGTTCCCCG TCGGCTACGG CACCCCAGAC
CGCTACACCT TTAAAGCCAC CGTCCGCGAT GCCGCCGGCA CCATCCAACA CATCGAACGC
ATCACCGGCC TACGCACCAT CACCCTGCGT CGCGAACCGG ACCAATGGGG CAAAAGCATG
ACCCTCGTGG TCAACGGCAT TCCGATCTTC GCCAAAGGCG CCAACCTCAT CCCATTCGAC
AGCATCCCCA CCCGCGTGAC CGAAGCGACC ATCCGCCGCA CCCTCCAAGA CGCCCACGCC
GCCAATATGA ACATGCTCCG CGTCTGGGGC GGCGGCCACT ATCAAGACGA ACACTTCTAC
GCCCTGGCCG ACGCACTGGG CATCATGATT TGGCAAGACT TCATGTTCGG CGGCGCCATC
CCCCCCGACG ACGTGGACTT CCGCGAAAAC GTCCGCCAAG AAGCCATCGA ACAACTCACC
CGACTTCGCG ACCACCCCAG CATCGTTCTG TGGTGCGGCA ACAACGAAGT ACAGACCGGC
TGGGAACATT GGGCCGACCG CATCACCTTC AAACAATCCC TGCCCCCTGA AGAACGCAGC
AACATAGAGC GCGGCATGAC CACCCTGTTC GGCAGCGTCC TGCGCGAAGC CGTCCACCTC
TACTCCCCCG GCACCCCATA CTGGGCCACC TCCCCCGGCA CCGACCTCGA CGGCCCAGCA
GACCAAACCA ACGACGGCGA CATGCACTAC TGGAAAGTCT GGGGCAACCC CGCACTCCCA
GTCACCGAAT ACCTCAATAT CACCCCGCGC TTCATGTCCG AATATGGCCT GCAATCCCTT
CCGGATCTGC GCACCATCCG CACATTCACC CGCCCAGAAG ACCTCTCCCT CACATCCCAA
GTGATGCGTG CCCACCAAAA ATTTGACAAC GGCAACGGCA ACCAACGCCT TCTGCTGTAC
ATCCGTCGCG CATTCGGCGA ACCCAAAGAT TTCGAAAGCT TCATCTACCT GAGTCAACTG
ATGCAGGCCG AAGGCATTGC CATTGCCGCC CAACACCTGC GTGCCGCACG GCCACAGACC
ATGGGATCCC TCTACTGGCA ACTTAACGAC GTCTGGCCCG GCGCCTCCTG GTCCAGCATT
GATTACGCAG GACGTTGGAA AGCCCTGCAC TACTACGCAC GCCGCTTCTA CGCCCCCCTC
ATGATCGCCG CACTCCGTAA AGACGGCATG ACCACCGTCT CCCTCGTTTC CGACCACACC
ACACCCCTGC ACGTCCATTG GCGCCTGCGC GTCCTAGACA TGGACGGCAC ACCACACCAC
ACCGACGACC AACACACCAC ACTGCCCCCC TTGAGTAGCC TCCAAGTCGC ACACTACAGC
GACGCACAAC TCCTCGGCCA CGCCGACCCC ACACACACCG TTGCCGTGTT TGAACTCCTG
GATGGCAACA CCCTCCTATC ACGTCAAACC CTCCTTTTCG ACGCCCCCAA ACACCTAAAA
CTCCCCCAGA CCCACATCCA CAACGCCTGG AAGACAGACC ACGGCATCTC TCTACTCACC
CTGACCAGCC CGACCCTGGC ACGCAACGTC TGGCTATCAT TTGGCGATAT TGATGCGCAA
CTTTCTGATA ACGCCTTCGA CCTCCTCCCC GGAGAACCCC TGACCATCCA TATCCGCAGC
ACCGCCCCAC TGACACAACT CCAACACGCC CTGCACATCC GTGACCTGGC CGCAACCCTG
GCCGGTGCCC CACCCGAACC CGAAGCAGCC CAGTGA
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| Protein sequence | MPRHRHICLR LAAFPLLAFG TLLTASAAPP SSHPLSNWHL RLAPDQPTTP TLPLKTTTWL
PAHVPGTVQT DLIAAGIVPD PFYRDQEAQI QWIGLNDWQY QTHFHIDTAT LTRQHIELVF
NGIDTLATVT LNGTPLLHPN NMFRRWRVDA KPLLKRGENI LEITLYSPIK KIQPWLTQQP
YALPGAYDSA FHDEPTARHS ATYVRKAPYQ FGWDWGPRIV TTGLWKNVTL DTWDTTRIND
LHIAQQRIDA DTAHLEAQLT LDATHRGPAH ITLQIFDPDG RPIAQYRQHP TLDTGTNHIH
LPVRIAQPRR WFPVGYGTPD RYTFKATVRD AAGTIQHIER ITGLRTITLR REPDQWGKSM
TLVVNGIPIF AKGANLIPFD SIPTRVTEAT IRRTLQDAHA ANMNMLRVWG GGHYQDEHFY
ALADALGIMI WQDFMFGGAI PPDDVDFREN VRQEAIEQLT RLRDHPSIVL WCGNNEVQTG
WEHWADRITF KQSLPPEERS NIERGMTTLF GSVLREAVHL YSPGTPYWAT SPGTDLDGPA
DQTNDGDMHY WKVWGNPALP VTEYLNITPR FMSEYGLQSL PDLRTIRTFT RPEDLSLTSQ
VMRAHQKFDN GNGNQRLLLY IRRAFGEPKD FESFIYLSQL MQAEGIAIAA QHLRAARPQT
MGSLYWQLND VWPGASWSSI DYAGRWKALH YYARRFYAPL MIAALRKDGM TTVSLVSDHT
TPLHVHWRLR VLDMDGTPHH TDDQHTTLPP LSSLQVAHYS DAQLLGHADP THTVAVFELL
DGNTLLSRQT LLFDAPKHLK LPQTHIHNAW KTDHGISLLT LTSPTLARNV WLSFGDIDAQ
LSDNAFDLLP GEPLTIHIRS TAPLTQLQHA LHIRDLAATL AGAPPEPEAA Q
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