Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1921 |
Symbol | |
ID | 6203240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 2139513 |
End bp | 2140247 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641703430 |
Product | peptidase M23 |
Protein accession | YP_001830595 |
Protein GI | 182682435 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGT CAATGGAGAT ATCAAAACTA TTACTGTCAA CAGCACTCGC ACTAGCACTC ACTGCCTGCA GCACTGCCAC TGCGGTACGC CCCAACAATA CGAGCAACCC ACGCACCACC GCCAAATCCA ACCAAACTGT GGTTGTGAAA CAGGGCGACA CACTATATGC AATCTCACGC CGCACCGGCG TTGCACCGCA AGATCTCGCC GCATGGAACA GGCTCACTGC ATCCAAAACC ATCTACCCGG GCCAAGTACT GCGTTTGTAT CCAGAGGATG CAACAGCATC GCCCACGCCC ACGCCCACAC AGCCCGTCAC ATCCCGACCC ACACCCTCAA ACCCATCCCC AACGACAACC AGCACCGCTC CAGCAAATAG CGGCTTCAAT TGGTTCTGGC CAACCGAGGG CGCTGTCGTC AGCAATTTCG TCGCTGGCCA AACCACCAAA CAAGGCGTGA GTATCAACGG CAACAACGGT CAAACCATTC GCGCCGCTGC CAACGGTACA GTGGTGTACT CCGGATCGGC CCTGATAGGT TACGGCGAAT TAATCATCAT CAAACACAAC GAGCAATGGA TCTCTGCATA CGGCCATAAC CGAAAACGTC TGGTCAATGA GGGACAAACC GTCAAAGCAA ACCAACCCAT TGCCGAAATG GGCCGCATGC TGTATTTCGA GATCCGCTAC AACGGTAAAC CCGTCGATCC ACTGGTTTAT CTCCCCAAGA AATAA
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Protein sequence | MERSMEISKL LLSTALALAL TACSTATAVR PNNTSNPRTT AKSNQTVVVK QGDTLYAISR RTGVAPQDLA AWNRLTASKT IYPGQVLRLY PEDATASPTP TPTQPVTSRP TPSNPSPTTT STAPANSGFN WFWPTEGAVV SNFVAGQTTK QGVSINGNNG QTIRAAANGT VVYSGSALIG YGELIIIKHN EQWISAYGHN RKRLVNEGQT VKANQPIAEM GRMLYFEIRY NGKPVDPLVY LPKK
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