Gene XfasM23_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1909 
Symbol 
ID6202643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand- 
Start bp2125224 
End bp2125880 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID641703418 
ProductOmpW family protein 
Protein accessionYP_001830583 
Protein GI182682423 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000000171006 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA TTTCACTGAT TGGCCTAGCT ACTATGAGTA TGCTGGCCTT TAACACCTCA 
GCCTTTGCGT TGGGCACGGC TTCTTCCAAC AGTGGTGCCT CCGGCAAGCA TTGGTCAGTG 
GTTGGCGGCG CTGCCCTCGT GCAACCAAAG AATGGGAAAA ATGCAGCACA GAATACTGTC 
AAGTTTGGTG GCGATGTTGC ACCAACGCTT AGTGTCACCT ACTACATCAA CGATAATGTG 
GGATTCGAGC TGTGGGGTAT TACTAAAAAG TTGAGTTATA CCGCAAAGAC TGACGCATCG 
GGCAAGATCG GCAATGTGAC TCAAAAGACA CCGTTAGCGT TGAGTGCGCA GTATCACTTT 
GGTCAGGCGC AAAACGTGTT CCGTCCGTTT GTTGGTGTTG GTTATTCTCA AGCTAAGTCT 
AGATTTACTG CTCTGGGATC TACCGATCGT GTGAATCTAG GCAATTTCCG CGGTGCAATC 
GGCACGATTG GTTTAGATAT GAATGTTGAT TCAAATTGGT TTGCTCGTCT TGATGCGCGT 
TATACGCGTT TCAGTAATAG CAATAGCAAG GCGGCTCTTT CTTCAAGTTT GGGTCTCGAT 
CAGAATCGGA GACTGGATCC GTGGTCCGTG GGTTTCGGCA TCGGCGCGCG TTTCTGA
 
Protein sequence
MRKISLIGLA TMSMLAFNTS AFALGTASSN SGASGKHWSV VGGAALVQPK NGKNAAQNTV 
KFGGDVAPTL SVTYYINDNV GFELWGITKK LSYTAKTDAS GKIGNVTQKT PLALSAQYHF 
GQAQNVFRPF VGVGYSQAKS RFTALGSTDR VNLGNFRGAI GTIGLDMNVD SNWFARLDAR 
YTRFSNSNSK AALSSSLGLD QNRRLDPWSV GFGIGARF