| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1881 |
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| Symbol | |
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| ID | 6201974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 2084808 |
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| End bp | 2085701 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641703390 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001830555 |
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| Protein GI | 182682395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.520099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTC GCTTCCGTAT CGTTGGGGTG TTGTTGACCA TGATAGCGGT GCCTGCTTGG
GGGGCGGCGC TCTACAAGTG TTTGAATGTT GACGGTATAC CGAGTTATGT CAGTAAGCGT
GTTGCTGGTG CGACGTGTAC GGTTGTGGTT AATCATGTGC ATCGTGTTCC ATCGCCGGCT
GTGGCTGTTC CCGCCGTGGT GCCTGTTTCC GGGGCTGTGA AGGATGCTGT GGTTTCAGCT
CCCTCGGTTG GTGGTGCTGC AGTGATGTCA GCGCCGGTGC GTCCCTCTGT AGCTGGAGGG
GGGAAGCGTT TGGTCAGTGG GCAGGTTTAT TCTTATATTC AGGATGGGGT GCGTCACTAC
AGTAGCTCCG TTCCGAGGCA AACGGCCAGT GTGCATGGGT TGCGCACGAT TTCTTATAGT
TTCATCGAAA CTTGTTATGC CTGTGCGCCG AATCCTGGGG TCAATTTTGG TTCGATGCCT
TTGAATACGT CTGCTTATCA TGGCGAAATC GTTTCCGCCG CAGGGGAGTT TGGGGTGGAG
GAGGCGTTGG TGCGTGCGAT TATTCATGCC GAATCTTCGT ATAACCCTCT TTCGTTGAGT
AGCGCTGGTG CGCAGGGGTT GATGCAGTTG ATGCCAGGGA CTGCGCGGCG TTTCGGGGTC
ACTGATTCCT ATGATCCGCT GCAAAATATC CGTGGTGGGG TGCAGTATTT GGCTTGGTTG
TTGAAGCGAT TTAACGGGAA TTTGACATTA GCAGCGGCTG GATATAATGC CGGTGAGGGT
GCGGTTGATC GTTACGGCGG TGTGCCACCG TATAGTGAGA CGCAGCGTTA TGTTGAGCGC
GTCAATGTGC TTCTTGGACG GTACCGTGCG GCGTTGATGA GTACACATCA ATGA
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| Protein sequence | MKSRFRIVGV LLTMIAVPAW GAALYKCLNV DGIPSYVSKR VAGATCTVVV NHVHRVPSPA
VAVPAVVPVS GAVKDAVVSA PSVGGAAVMS APVRPSVAGG GKRLVSGQVY SYIQDGVRHY
SSSVPRQTAS VHGLRTISYS FIETCYACAP NPGVNFGSMP LNTSAYHGEI VSAAGEFGVE
EALVRAIIHA ESSYNPLSLS SAGAQGLMQL MPGTARRFGV TDSYDPLQNI RGGVQYLAWL
LKRFNGNLTL AAAGYNAGEG AVDRYGGVPP YSETQRYVER VNVLLGRYRA ALMSTHQ
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