| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1825 |
|---|
| Symbol | |
|---|
| ID | 6203089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 2028886 |
|---|
| End bp | 2030493 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641703336 |
|---|
| Product | prophage antirepressor |
|---|
| Protein accession | YP_001830502 |
|---|
| Protein GI | 182682342 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3617] Prophage antirepressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGTGA ATCGGATTCA CACCACTGGC AGCACACGAA ACGGCAGGGC CGAGAAACGC
GCACCCTCCA CCGGCTTGCA TCGTAAGGAC AACATCATGA ATGCACCCTC TGAATTCCAT
CTCCAGTTTG AATCCCACGC CGTGCGTGTC CAGCTCGACG AACACAAGCG GCGATGGTTC
AACGCCAATG ACATTTGCGC GGCGTTGGAG TTGTTAAATC CGCGTGCTGC ACTTGCTCAG
CATGTGGATG CGGAGAACGT ATCGAAACGC GCCGCCATCG ACACTATCGG GCGGACCAAA
CACGTTAACT ATCTTAATGA GTCAGGGGTG TACGCCTTGC TCATCGGCAG CACCAAAGAG
GCGGCTAAAC GCTTTAGACA GTGGCTCATC AGTGAAGCAC TGCCCGCAGC CGCAGCTCGA
AAAGCGGGCC AACACATTGT CCCGCTGCAT CACGCGCCTT CCATCCCAAG CCCCTTCCAA
CCCACAGAGG ACCACGCAAT GAATGCAATC ACCCCATTCC AATTTGAATC GCACGCCGTG
CGTACCGTGG TTGATGATCA CGGTGAAGTG TGGTTTGTCG GCAAAGACGT TGCCGATGTA
CTCGGTTACA CCAACCATAA CAAAGCTTTG GGCGATCATT GCAGGGGGGT GCCGAAGCGT
TACCCCCTTC AGACGTCAGG CGGAGTTCAA GAAATCCGGA TCATCTCCGA GCCTGACATG
CTCCGCTTGA TTGTGAGCAG CAAACTCCCT GCCGCAGAGC GGTTCGAGCG TTGGGTATTT
GAGGAAGTCC TGCCCACCCT GCGCAAGACA GGCAACCGTC CCGCGCTTGA CCACTCCACT
CATTCCGCCA ACGCAATCAC TCCATTCCAA TTTGAATCAA AAGATGTGCG TATTCAACTC
GACGAGGCCA ATGCGCCTTG GTTCAACGCC AACGATGTTT GTGCCGTTCT GGAGTTTGGT
AATCCACATC AAGCCATTGA ATCCCACGTG GATGTAGATG ACCTCCAGAA GTTGGAGGTC
ACCGACGCGC TGGGGCGAAC TCAACGCGTT AACCACATCA ACGAATCCGG TTTGTACTCC
CTGATCATGG GCAGCACAAA ACCTGCGGCC AAGCGTTTTA AGCGTTGGGT GACGAGCGAA
GTTCTGCCCA CCCTGCGCAA GACAGGCACC TACTCCACAC CAGGAGCACT GCCCACCTTG
CCTGGGCCGA CACAGGATCG CGTTGCCGCA CTCCTGTTAA TCGGCCAATT CGTTTCCAAA
GTGACTGGCG TAAAACCAGG AATTGCTGCC GCCGCGACAT TGGCCTGTAT CAAAAGCAAT
ACGAATTTAA CGACCGAAGA AATACGCCGC GCATTGCCTG CGTTACAGGA ACCGCTTTGC
CTGCTCAACG CCACGCAACT AGGCAAGCAG CTGCATTGCT CGGCCAAGGC GGTGAACCAA
TTATTAGCCT CCAGTGGCCT GCAATTCCGT AATGAACGCG ACGACTGGGA ATTAACCGAA
GCCGGTCGCG TATGGGGCGA AGCCATTCCG TACTCACGCA ACGGGCATAG CAGCTACCAA
ATTCTCTGGA ATCCGACGGT GGTTGACTCG CTGAAGGTCG CCGCCTGA
|
|---|
| Protein sequence | MGVNRIHTTG STRNGRAEKR APSTGLHRKD NIMNAPSEFH LQFESHAVRV QLDEHKRRWF
NANDICAALE LLNPRAALAQ HVDAENVSKR AAIDTIGRTK HVNYLNESGV YALLIGSTKE
AAKRFRQWLI SEALPAAAAR KAGQHIVPLH HAPSIPSPFQ PTEDHAMNAI TPFQFESHAV
RTVVDDHGEV WFVGKDVADV LGYTNHNKAL GDHCRGVPKR YPLQTSGGVQ EIRIISEPDM
LRLIVSSKLP AAERFERWVF EEVLPTLRKT GNRPALDHST HSANAITPFQ FESKDVRIQL
DEANAPWFNA NDVCAVLEFG NPHQAIESHV DVDDLQKLEV TDALGRTQRV NHINESGLYS
LIMGSTKPAA KRFKRWVTSE VLPTLRKTGT YSTPGALPTL PGPTQDRVAA LLLIGQFVSK
VTGVKPGIAA AATLACIKSN TNLTTEEIRR ALPALQEPLC LLNATQLGKQ LHCSAKAVNQ
LLASSGLQFR NERDDWELTE AGRVWGEAIP YSRNGHSSYQ ILWNPTVVDS LKVAA
|
|---|
| |