| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1793 |
|---|
| Symbol | |
|---|
| ID | 6202669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1993783 |
|---|
| End bp | 1994508 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641703304 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001830470 |
|---|
| Protein GI | 182682310 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.224575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGC GAGCGGCCCT TAAGCCTATG TGTACAGTTC TGGCGGTGGC GCTGGTGCTG
TCCGGTTGTG CTACAGGTGG ATCTTATGTG CAGCGTGACC AGTCTGGTAA TTCCACAGAG
CAGCGAAACC GGACCGGGCG GGATGCGGCC ATTGGTGCGG CCATTGGCGC TGCTGCGGGT
TTGTTGACTG GTAAAAATGC CACCAAGCGG AGACAGCGCG CGATGATTGC TGCTGGTATC
GGTGCACTTG GCGGGGCAGC GATTGGTAAT TACCAGGATC GTCAAGAACG CGCTTTGCGT
GAGCGCACGG CCAATACTGG CATTGATGTC AAGCGTGACG GTGACAATAT CACTCTCAAT
TTGCCGGACG GTATTACTTT CGATTTTGGT AAGTCGATGC TCAAGCCGCA ATTTTATGGC
GCACTTAAAA ATGTCGCTTC GACGTTGCGC GAGTATAACC AGACGATGAT TGAGGTGGTT
GGTTATACCG ATAGTATTGG CAGTGATGTG GTGAATCAGC GCTTGTCTGA GGATCGTGCT
GGTGCGGTTG CTAGTTATTT AGCGGCACAA GGTGTGCAGC GTGAACGTAT GGAAATCTCG
GGGATGGGAA AACGTTACCC GATTGCCGAT AACAGTACAG AAGCTGGGCG TAGTAAGAAC
CGGCGTGTTG AAATACATTT GATTCCATTC AGTGCTGAAA ATAGCGGTGC CACAGGCATG
CATTGA
|
|---|
| Protein sequence | MMMRAALKPM CTVLAVALVL SGCATGGSYV QRDQSGNSTE QRNRTGRDAA IGAAIGAAAG
LLTGKNATKR RQRAMIAAGI GALGGAAIGN YQDRQERALR ERTANTGIDV KRDGDNITLN
LPDGITFDFG KSMLKPQFYG ALKNVASTLR EYNQTMIEVV GYTDSIGSDV VNQRLSEDRA
GAVASYLAAQ GVQRERMEIS GMGKRYPIAD NSTEAGRSKN RRVEIHLIPF SAENSGATGM
H
|
|---|
| |