Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1738 |
Symbol | |
ID | 6202948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1920212 |
End bp | 1921090 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641703248 |
Product | ribonuclease BN |
Protein accession | YP_001830416 |
Protein GI | 182682256 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.554379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGAGA ACCTCCTTTC ACCCAAACAA CTGAACAAAC ACCTAGAACG CTTGCAACAA AGCCTACCGA TGGCGCTGGT CAACCGTTTC AACGAGATCG ACCTACTGAC TCAAGCCGCC TCACTGTCCT TCTACGCACT GCTATCACTG GCACCACTAC TGGTACTGCT CCTCTGGCTA ACTGCCTCAC TCTATCCTGC GGCACAAGCA ACGCTGATCA CACAGATTGA ACAATTAGCG GGTAACAGCG CAGCCACCGT CGCCAAAACG ATTTTACAAA ACGCCACCGC ACAACCCACT TTCGGTACCC TGGCAGGACT GTGGAGCACA CTGTTATTGT TCATAGGTGC TACGGCAGTG TTCGCACAAC TGCAAAACGC GCTGAACCTC ATCTTTCACA CCGATCAACG GCGCCTGGAA GGAATAAAAG CATGGCTGAA AAAGCGTGTG TTTTCTTTCG GTGTCGTGTT AGCACTGGGC TTCCTGCTGA TCATCTCCAT GGTCGCCACA ACCGCACTGC AAGTCGTGTT TACACACCTG CCTTCCATGC TGCCGACGAT AGGCTACCTA AGTACACTGG TGCTGTACAC GCTAGCCTTT GCGTTTTTAT ACCGCTATTT ACCAGACCGA ACAGTCAACT GGCGCCAAGC CTACATCGGC GGCGCAATCA CCGCTTGCTT ATTCACACTG GGTCGCTATG CCATCGGGCT GTACATCAGC ACCGCAGCAC CAGGCAGCGC CTACGGCTCA ATGGGTGCAT TGGTCATTAT GCTGGTATGG ATGTACTACA CATCCGTCGT ATTCTTCATC GGCGCACTGC TGACTGCCGT CATCGACGAA CGGTTACGTG ATCACAAGAT CCGAAACATC CAACACTGA
|
Protein sequence | MAENLLSPKQ LNKHLERLQQ SLPMALVNRF NEIDLLTQAA SLSFYALLSL APLLVLLLWL TASLYPAAQA TLITQIEQLA GNSAATVAKT ILQNATAQPT FGTLAGLWST LLLFIGATAV FAQLQNALNL IFHTDQRRLE GIKAWLKKRV FSFGVVLALG FLLIISMVAT TALQVVFTHL PSMLPTIGYL STLVLYTLAF AFLYRYLPDR TVNWRQAYIG GAITACLFTL GRYAIGLYIS TAAPGSAYGS MGALVIMLVW MYYTSVVFFI GALLTAVIDE RLRDHKIRNI QH
|
| |