Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1721 |
Symbol | |
ID | 6202890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1902316 |
End bp | 1903179 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641703231 |
Product | HflC protein |
Protein accession | YP_001830399 |
Protein GI | 182682239 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT ATTTGTGGAT TGTTGTTACG GCTGTGCTTT TTCTTAGTTT GTTCAGCTCG ATCTTTGTAG TGCGCGAGGA TCAGACTGCG ATGGTCATCA ATCTTGGTCG TGTGGTGCGT TACGACCTAA AGCCAGGTTT ACATTTCAAG ATCCCGTTGG TTGAGTCGGT GCGTCTATTT GATCGTCGTT TCAAGGTGAT GGCTACGGAG CCAGCGCGCT ACTTTACTGC TGAACAGAAG GATGTCAGTG TCGATTTTTT TGCAATTGGC TACATTGAAG ACGTGCGTTC CTTTTACCGT GCTACCGGTG GCGATGAGTC TCAAGCTGCC GCCCGTTTGG CGCCTATCAT CACTGATTCG CTGCGTAACC AGATTAACTC GCGCACCTTG CAGGAGTTGG TGTCTGGAGA TCGTAGTGAG TTGATTGCTG GTCAATTGAA AAGTATCAAT GCTGCGACTA AAGGGTTAGG TGTGCATATT GTTGATCTTC GAATCAAGCA GATTGAGCTG CCAGTAGACA GCCAGGTGAT CAGTGATGTT TACGAACGCA TGCGTGCCCA GCGTAAGCAA GAGGCTGCCA AGTTGCGTGC TGAGGGTGAG GAGCGGTCGT TGAGCATTCG TGCCCAGGCC GATCGCGAGT CCACTGTGTT AATTGCTGAT GCTGAGCGTG ATGCCCAGAA ATTGCGTGGT GAGGGTGATG CTGAAGCTGC GCGTGTCTAC GGCAAAGCTG GTGCTAATGA CCCCGCGTTC TACGCTTTTT ACCGTAGTCT GGAGGCTTAC CGAAACGGTA TGGCTGATGG CAATGGTGTC ATTGTGCTCG ACAAGAACGA TCCGTTCTTG AAGTACTTTA AGAGCGATCA TTGA
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Protein sequence | MKNYLWIVVT AVLFLSLFSS IFVVREDQTA MVINLGRVVR YDLKPGLHFK IPLVESVRLF DRRFKVMATE PARYFTAEQK DVSVDFFAIG YIEDVRSFYR ATGGDESQAA ARLAPIITDS LRNQINSRTL QELVSGDRSE LIAGQLKSIN AATKGLGVHI VDLRIKQIEL PVDSQVISDV YERMRAQRKQ EAAKLRAEGE ERSLSIRAQA DRESTVLIAD AERDAQKLRG EGDAEAARVY GKAGANDPAF YAFYRSLEAY RNGMADGNGV IVLDKNDPFL KYFKSDH
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