Gene XfasM23_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1712 
Symbol 
ID6202869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1892130 
End bp1893365 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content53% 
IMG OID641703222 
Productouter membrane assembly lipoprotein YfgL 
Protein accessionYP_001830390 
Protein GI182682230 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATG TTATGAAGTT CAGGAAATTT TTCACAATTG CATTATTCGC TACCGTTTTT 
GTTGGGTGTG GCAGTGTAAA AAGTGTGTTT CGCGGTAAAG ATGCCGATGC TAGAAAGGCT
CAGGAACCTG CCGATCTTGC TGATTTCACC CCGACCGTAA AGGTCGGCAA GCTTTGGGCA
GTGGATCTTG GGAAGGGTGA GGGTCGCATT GGAGTGCGGC AACGTCCGAC CGTGGTCGAT
GGCAAGGTAT ATGCAGCAGC CATCGGTGGT GGTGTGCTCG CACTGGATTT ACACACAGGG
CAGGTCTTGT GGAAGTACGT ACCGGCTCAA GGAAGTAACG CAAAGGACAA CAAGAAATTT
AGTAAAAAAT CGATGCTGCG TCTTGCTGGT GGCCCCGGTG TTGGGGATGG TCTGGTGGTG
ATCGGTACCC TAGATGGTCA AGTGATCGCT TTGGACCAGA ACGATGGTAC TGAGAAGTGG
CGCGCCAATG TACCGAACGA GGTGATTGCA GCGCCAGCTG TGGCGCAGAA CATGGTGTTT
GTGCGCAGTA ATGATGGTCG CGTGACCGCA TTCGAGGGGG CTACTGGTCA ACGTCGCTGG
TTCACTGAGC GCGAGTCGCC TAGCTTGACG GTTCGTGGTA ATGCGCCGGT GATCCCTGGG
ACAGATTTGC TGTTCGTGGG AAATGACGAC GGTACTATCA GTGCATTAGC GATGCATGAT
GGAAATTCCC TGTGGGTACA GTCTGTTGCT ATGCCGGAAG GTCGTAGTGA ATTGGAGCGT
ATGGCTGACG TTGACGGTGT CCCTGTTCTG GAAGGAAATA CTCTGTACGC AACCAGCTAT
AAAAACGAGA CTGTTGCGAT TGATGGGGCG AGCGGTCGTA TGCTTTGGAA TCGCGAGCAC
GGTGGAGCGG GTGGTGTCGG CGTTTCTTCC AACTATATTG TGGTGGCTGA TAATGATGGC
ACCGTATGGG GCTTGGACAA GCCGACTGGA AGTGCCTCCT GGTCGCAACC TGCGTTAGCA
CGCCGCTTTT TGACAGGCGT GGCGATCCAG GGAGATTACG CGGTGGTGGG TGATTACAAA
GGCTATCTGC ACTGGTTGCG TCTCAGTGAT GGTGCACTTG CTGCTCGCGA ACGCTCTGGG
AGTGCCGCTA TCGTTGGGCA ACCTGTCGTC GCTGACAATG TGCTTCTGGT GCAGAGTAGT
AATGGAAAGC TCGCTGCTTT TCGTCTGATG CAATAA
 
Protein sequence
MRDVMKFRKF FTIALFATVF VGCGSVKSVF RGKDADARKA QEPADLADFT PTVKVGKLWA 
VDLGKGEGRI GVRQRPTVVD GKVYAAAIGG GVLALDLHTG QVLWKYVPAQ GSNAKDNKKF
SKKSMLRLAG GPGVGDGLVV IGTLDGQVIA LDQNDGTEKW RANVPNEVIA APAVAQNMVF
VRSNDGRVTA FEGATGQRRW FTERESPSLT VRGNAPVIPG TDLLFVGNDD GTISALAMHD
GNSLWVQSVA MPEGRSELER MADVDGVPVL EGNTLYATSY KNETVAIDGA SGRMLWNREH
GGAGGVGVSS NYIVVADNDG TVWGLDKPTG SASWSQPALA RRFLTGVAIQ GDYAVVGDYK
GYLHWLRLSD GALAARERSG SAAIVGQPVV ADNVLLVQSS NGKLAAFRLM Q