| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1662 |
|---|
| Symbol | rdgC |
|---|
| ID | 6202799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1840188 |
|---|
| End bp | 1841096 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641703174 |
|---|
| Product | recombination associated protein |
|---|
| Protein accession | YP_001830343 |
|---|
| Protein GI | 182682183 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2974] DNA recombination-dependent growth factor C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTC GTAATCTGAC CTTGTTTCGC TTCCCAACGT CACTAGATTT CTCACAGATC
GACAGCATAC TACCCAACGC ACGGTTGCGA CCGGTTGGCC CATTGGAAAT GACATCACGT
GGATTTATCT CCCCCTTTGG GCGTGAAGAG CAGGAAGTAC TCAACCAACG TCAAGGCGAC
TTTCTGTGGT TGACCGTCGG CAGTGAAGAC AAAATCCTGC CTGCTTCAGT CGTTAACGAC
CTGCTGACGC GTAAATGCAG CGAGATTGAG GAAAAGAAAG GCCACCCTCC AGGCGGACGT
GAACGCAAAC GCATCAAAGA CGATTTAATC CACGAACTGC TACCACGCGC TTTCGTTAAA
AACTCCCGCA TTGATGCAAT GCTTGATCTA CGTTACGGCT ACGTGGCCGT AGATACCGCA
AGCCGCAAAG CCGCTGAAAC CGTCATCAGC GAGATCCGCG ACTTGCTTGG CAGCTTTCCA
GCACTGCCGC TCAACGCCGA GATTTCAATA CGCTCCATGC TGACGAGCTG GATTGCTGGC
GAGCCACTGC CCGAACACCT CAACCTGGGT GATGAGTGCG AAATGAAGGA TGCCACCGAA
GGCGGTGCAA TCATCAAGTG CCAGCACCAA GCGCTACGCT GCGAAGAAAT TGACAAACAC
TTAGAAGTTG GCAAGCAAGT AAGCAAACTG GCACTCATAC TCGACGACCA CGTTTCATTT
GTACTCGGTG ACGATCTGGT GATCCGCAAA CTAAAATTCC TCGACGGCAT GTTGGACCAG
CTCGAACACA GTGACACCGA TGGAATCCGT GCTGAACTTG ATGCGCGCTT TGCGTTGATG
AGTGCCGAAA TACGGCGACT GTTTCTCCTA TTAGAAGTTC CGCTGAAGTT GAGCAAAGCA
AACAACTAA
|
|---|
| Protein sequence | MFFRNLTLFR FPTSLDFSQI DSILPNARLR PVGPLEMTSR GFISPFGREE QEVLNQRQGD
FLWLTVGSED KILPASVVND LLTRKCSEIE EKKGHPPGGR ERKRIKDDLI HELLPRAFVK
NSRIDAMLDL RYGYVAVDTA SRKAAETVIS EIRDLLGSFP ALPLNAEISI RSMLTSWIAG
EPLPEHLNLG DECEMKDATE GGAIIKCQHQ ALRCEEIDKH LEVGKQVSKL ALILDDHVSF
VLGDDLVIRK LKFLDGMLDQ LEHSDTDGIR AELDARFALM SAEIRRLFLL LEVPLKLSKA
NN
|
|---|
| |