| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1592 |
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| Symbol | |
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| ID | 6202709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1764870 |
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| End bp | 1770239 |
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| Gene Length | 5370 bp |
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| Protein Length | 1789 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641703104 |
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| Product | hemolysin-type calcium binding domain-containing protein |
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| Protein accession | YP_001830274 |
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| Protein GI | 182682114 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA ATACGGCAGG TAAAGCCGCA TCTGATCTAG TTGATTACAA TAATATAAAT
AATTTCAGTT CAGCCTATGC AACTGGGGTT ATTGCCTTTA CGCAGGAGTA CCAGAATCAG
TATTCCATAA TGATCCGGAG TATGGATCCG CAAAAAGCCA TCATTCAATC TTTGGTGGCT
GCACATCAGC ATCAGGCCGA TCTGTACTGG GCGTATTCGG ATAGAGCCAA TCGTGCTGGA
AATGCTGTCT TGAGGGATAT GTATGCCGAT GCGGCACTAG GAGCGGCTTA CCAGACGCGG
GATTTATCGC TGAAGACAGA TAGCGCCCAG GCGATACTTA ATTCACATTA TGATCGGGCA
AGATCAGGAT ATTCCGCATT AATCGAGGCC AGTCCAGCAC TGCGCAATGC CTTGAAATAT
GCAGGGATTG CGGGTGATCT GGCGGGCATC GGCAATGCTC TCATGTTTGG CGGTCCCGGC
GATGTTGCAA AAGCGTTAGG TATCATCGCT ATTGGATTGG CCGCTGGGTC CTTAGTAGGG
CTTGGAGCAG CGGCTATTGG AGCTACTGGA CTTGGTGCTG CGGTTGCAGC TGGTTTGGCC
GCTACTCTCG TGCAATTGAC TGCCGAATAC TTGATACCAC AGGCATGGTG GGAAAGCATC
GAGAATAAAA GCAAAGAAAC ATTCAAAGAT CTCTTTGATC AAATCCGCCG TTTCACCCCG
CGTCGCGACC CGCTAGTCCT GGACTTGGAC GGTGACGGCA TCGAAACCGT GGCCGCGGGT
AAACATATCC TGTTTGATCA CGACGGCGAC GGCATTAAAC ACGCCAGCGG CTGGGTGAAG
CCCGATGACG GCTTCTTGGT GCTGGACCGC AACGGCAACG GACGTATTGA TGATGGCAGT
GAATTATTCG GTGCCGATAC CGTGCTAGCC AACGGTCACA AAGCCACCTC CGGTTTTGAG
GCACTGCGCG ACCTGGACAG CAACGGTGAT GGCCTCTTCG ATGCCGCCGA CGCCCGCTTT
ACGGACGTGC GCGTCTGGCG CGATCTCAAC CAAGATGGCC AGTCCCAGGC CAACGAGCTG
TTCACCCTCT CCAGCCTAGG CATTGCCTCC ATCACGCTGA CCCCCACCAA CACAGAGGAT
GTGGACTTAG GCAACGGTAA CCTCATTGAC AACCGCGGTA CCTACACCCG TACCGATGGC
CGTACCGGCG TGGTGGGCGA CCTGCAATTA GGTCTTGAGC ACTTCTACCG CGATTACAGC
GGCGCTAAAG AGCAGGTGAC CGTCACGGAT GCCGCTGCGG CCTTGCCACA TTTGACAGGC
AGCGGTGCGG TGCGCGATCT GCAAGAGGCC GCCAGCCTGT CGCCCGCCTT ATTGGCGGCT
GTTCAGGCGT TGACACCCGG CACTACCCGC GACACCATGC GCACCGCGTT GGATCCGCTT
CTCGCCCTCT GGGCCGGCAC CTCGGCCATG CCTAGCACCG AGCAGCGCTT GGAGACCTCC
GGAGCGGTGC CCCGTACCGT CTATTACCAT GGTGCCGTTC CCGCTGCCGT GACCGCCCAG
GGGAAGGAGG CAGTGCAAGC CTGGATACAG CAGCAGCACG CCCAACTCGG CCCGATCATC
GCCATCTTGG AGAAGTTCAA CGGCTCCAGC TTGGTCAGCG AACGCAATGG CCAGGTGTCC
ACAGGGGGCG AAACCTTCAC CTGGAACCGT GTCATCCATC CTGACGGACA CAGCGAAGAC
GTGATGAGCA TCCTGCTCCA GCCGGAGCAG ATCAATAGCT TGATGAGCGC CTACGCCAGC
CTGAAAGAAT CTGCCTATGC CGGACTGGTC CTCGGCACCC GGTTGAGTGA TTACCTGTCT
GGACTCACCC TGACCTACAG CAATGATGCC TTTGGATGGG ATGCGTCCGC CCTAGAGGCC
AAGCTAGATC ACACCTGGCA GCACAACAAA ACCCAAGCGC TTCAGGATGT CATGGACCTG
TACCGCTATG GCAGTAACGC CGTAGCGGCG AGCGGCTGGA AACCCTTCGA TGCCTTACGC
CACATGATCG ACCGGGCCGC AGCAACACCT GATGGGAGGC AGGCCCTGGC CGATGTGGGC
ATTCGCTTTA TTTCTGGAAA TGCCGAAGGC AGTGACGCCA CAGATCTGCT GTTTGGCGAT
GCGGGTGCCA ATCTCCTGCG GGGCGGCGGC GGTGATGATC TGCTCTCCGG CGGTGATGGA
GACGACACCC TGGAAGGCGG TGCGGGCAAC GATACCCTCT ACGGCGGCGA TGGCGATGAC
GTCCTAGACG GCGGCATGGG CAGCAACCGC CTAGAAGGCG GCGCTGGTAA TGATGTCCTG
AAAGTGTCGT ATTGGTCCGC AGATAACGTA CTGAACGGTG GCACCGGCGA TGACACGTTG
TATGGCAGCG CCTTTGCGGA CACATACCTA TTTAATCAAG GAGACGGCCA CGACACGATC
ATTGAGCAAA GCGGTGATGA CAAACTCGTC TTTGGTGAGG GGATTCTTGC CGCTGATGTC
CGGTTACTAC GCCAAGGGCA AGATGTGGTG TTGGACCTGG GGAACGGCCA CGACAGCATC
CGTTTGAAGG ACTGGTTGAC TTCCAATGGC ACCCGCAACC ATAGCGCCGA TATTGAACAG
ATTGTCTTTG CCGATGGAAC GCTCTGGACT CCGGAGACCT TGAGCAGCAT GGGCCTCACC
ACGCTGGGCA CCTTGGGCAA TGACACCCTC AAGGGCTGGC AAGGCAAGGA TATTCTGCTG
GGCGGCGATG GCGATGACGT CCTAGACGGC GGCGAAGGCA GCAACCGCCT AGAAGGCGGC
GCCGGTAACG ATGTACTGAA AGTGTCGTAT TGGTCCGCAG ATAACGTGCT GAACGGTGGC
AGCGGTGATG ACACGTTGTA TGGCAGCGCC TTTGCGGATA CGTATCTATT CAACAAAGGA
GACGGCCACG ACACGATCAT TGAGCAAAGC GGTGATGACA AACTCGTCTT TGGTGAGGGC
ATTGCAGCCG CTGATGTCCG GTTACTGCGC CAAGGGCAAG ACGTGGTGCT GGACCTGGGC
AACGGCCACG ACAGCATCCG CTTGAAGGAC TGGTTGACTT CCAATGGCAC CCGCAACCAT
AGCGCCGATA TTGAACAGAT CGTCTTTGCC GATGGAACGC TCTGGACTCC AGAGACCTTG
AGCACGCTGG GTCTGACGAC GCTGGGCACT TCCGGCAATG ACATTCTGAA GGGCACTGAC
GTCCGGGATA GTTTGTTGGG TGGTGATGGA GATGACACCC TCTACGGCGG TGGCGGCAAT
GATCTGCTGC TGGGTGGTGC TGGCGATGAC GTCCTAGACG GCGGCGAAGG CAGCAACCGC
CTAGAAGGCG GCGCCGGTAA CGATGTACTG AAAGTATCGT ATTGGTCCGC AGATAACGTG
CTGAACGGTG GTACCGGCGA TGACACGTTG TATGGCAGCG CCTTTGCGGA TACGTATCTA
TTCAACAAAG GAGACGGCCA CGACACGATC ATTGAGCAAA GCGGTGATGA CAAACTCGTC
TTTGGTGAGG GCATTGCAGC CGCTGATGTC CGGTTACTGC GCCAAGGGCA AGACGTGGTG
CTGGACCTGG GCAACGGCCA CGACAGCATC CGCTTGAAGG ACTGGTTGAC TTCCAATGGC
ACCCGCAACC ATAGCGCCGA TATTGAACAG ATCGTCTTTG CCGATGGAAC GCTCTGGACT
CCAGAGACCT TGAGCACGCT GGGTCTGACG ACGCTGGGCA CTTCCGGCAA TGACATTCTG
AAGGGCACTG ACGTCCGGGA TAGTTTGTTG GGTGGTGATG GAGATGACAC CCTCTACGGC
GGTGGCGGCA ATGATCTGCT GCTGGGTGGT GCTGGCGATG ACGTCCTAGA CGGCGGCGAA
GGCAGCAACC GCCTAGAAGG CGGCGCCGGT AACGATGTAC TGAAAGTATC GTATTGGTCC
GCAGATAACG TGCTGAACGG TGGTACCGGC GATGACACGT TGTATGGCAG CGCCTTTGCG
GATACGTATC TATTCAACAA AGGAGACGGC CACGACACGA TCATTGAGCA AAGCGGTGAT
GACAAACTCG TCTTTGGTGA GGGCATTGCA GCCGCTGATG TCCGGTTACT GCGCCAAGGG
CAAGACGTGG TGCTGGACCT GGGCAACGGC CACGACAGCA TCCGCTTGAA GGACTGGTTG
ACTTCCAATG GCACCCGCAA CCATAGCGCC GATATTGAAC AGATCGTCTT TGCCGATGGA
ACGCTCTGGA CTCCAGAGAC CTTGAGCAGC ATGGGCCTCA CCACGCTGGG CACCTCCGGC
AATGACACCC TCAAGGGCTG GCAAGGCAAG GATATTCTGC TGGGCGGCGA TGGCGATGAC
GTCCTAGACG GCGGCGAAGG CAGCAACCGC CTAGAAGGCG GCGCCGGTAA CGATGTCCTG
AAAGTGTCGT ATTGGTCCGC AGATAACGTG CTGAACGGTG GCAGCGGTGA TGACACGTTG
TATGGCAGCG CCTTTGCGGA TACGTATCTA TTCAACAAAG GAGACGGCCA CGACACGATC
ATTGAGCAAA GCGGTGATGA CAAACTCGTC TTTGGTGAGG GCATTGCAGC CGCTGATGTC
CGGTTACTGC GCCAAGGGCA AGATGTGGTG CTGGACCTGG GTAACGGCCA CGACAGCATC
CGTTTGAAAG ACTGGTTGAC TGCCGAGGGT CGGCGTAACT ACAGCGCCGA TATTGAACAG
ATCGTCTTTG CCGATGGAAC GCTCTGGACC CCGGAAACCT TGAGCAGCAT GGGCCTCATC
ACGCTGGGCA CCTTGGGCAA TGACACCCTC AAGGGCTGGC AAGGCAAGGA TATTCTGCTG
GGCGGTGCTG GCGATGACGT CCTAGACGGC GGCGAAGGCA GCAACCGCCT AGAGGGCGGC
GCTGGTAATG ATGTCCTGAA AGTGTCGTAT TGGTCCGCAG ATAACGTACT GAACGGTGGC
ACCGGTGATG ACACGTTGTA TGGCAGCGCC TTTGCGGACA CATACCTATT TAATCAAGGA
GACGGCCACG ACACGATCAT TGAGCAAAGC GGTGATGACA AACTCGTCTT TGGTGAGGGG
CTGCATCGGG AAGAGGCGTG TTTTACGCGC TCAGGTGATG ATCTGTCTAT CCTGTTCAAT
GGGAGTGAGG ATCAGGTGAC TGTGGCGGGT TGGTTCAGTG CGGCGGCGCA TCAGGTGGAA
TCGTTGGTGT TCCAGGATGG GACGGTGCTG TCCGGTGAGG TGGAGCGTTT GATTGCGGCG
ATGGCGCTGT CCCCTGCGGT GACGACGACG CAAGCCAGTG TGCGTGATCA CAAGGAGTTG
CCCAGGTTGG TCGCCAGTTC GATTGTGTGA
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| Protein sequence | MSDNTAGKAA SDLVDYNNIN NFSSAYATGV IAFTQEYQNQ YSIMIRSMDP QKAIIQSLVA
AHQHQADLYW AYSDRANRAG NAVLRDMYAD AALGAAYQTR DLSLKTDSAQ AILNSHYDRA
RSGYSALIEA SPALRNALKY AGIAGDLAGI GNALMFGGPG DVAKALGIIA IGLAAGSLVG
LGAAAIGATG LGAAVAAGLA ATLVQLTAEY LIPQAWWESI ENKSKETFKD LFDQIRRFTP
RRDPLVLDLD GDGIETVAAG KHILFDHDGD GIKHASGWVK PDDGFLVLDR NGNGRIDDGS
ELFGADTVLA NGHKATSGFE ALRDLDSNGD GLFDAADARF TDVRVWRDLN QDGQSQANEL
FTLSSLGIAS ITLTPTNTED VDLGNGNLID NRGTYTRTDG RTGVVGDLQL GLEHFYRDYS
GAKEQVTVTD AAAALPHLTG SGAVRDLQEA ASLSPALLAA VQALTPGTTR DTMRTALDPL
LALWAGTSAM PSTEQRLETS GAVPRTVYYH GAVPAAVTAQ GKEAVQAWIQ QQHAQLGPII
AILEKFNGSS LVSERNGQVS TGGETFTWNR VIHPDGHSED VMSILLQPEQ INSLMSAYAS
LKESAYAGLV LGTRLSDYLS GLTLTYSNDA FGWDASALEA KLDHTWQHNK TQALQDVMDL
YRYGSNAVAA SGWKPFDALR HMIDRAAATP DGRQALADVG IRFISGNAEG SDATDLLFGD
AGANLLRGGG GDDLLSGGDG DDTLEGGAGN DTLYGGDGDD VLDGGMGSNR LEGGAGNDVL
KVSYWSADNV LNGGTGDDTL YGSAFADTYL FNQGDGHDTI IEQSGDDKLV FGEGILAADV
RLLRQGQDVV LDLGNGHDSI RLKDWLTSNG TRNHSADIEQ IVFADGTLWT PETLSSMGLT
TLGTLGNDTL KGWQGKDILL GGDGDDVLDG GEGSNRLEGG AGNDVLKVSY WSADNVLNGG
SGDDTLYGSA FADTYLFNKG DGHDTIIEQS GDDKLVFGEG IAAADVRLLR QGQDVVLDLG
NGHDSIRLKD WLTSNGTRNH SADIEQIVFA DGTLWTPETL STLGLTTLGT SGNDILKGTD
VRDSLLGGDG DDTLYGGGGN DLLLGGAGDD VLDGGEGSNR LEGGAGNDVL KVSYWSADNV
LNGGTGDDTL YGSAFADTYL FNKGDGHDTI IEQSGDDKLV FGEGIAAADV RLLRQGQDVV
LDLGNGHDSI RLKDWLTSNG TRNHSADIEQ IVFADGTLWT PETLSTLGLT TLGTSGNDIL
KGTDVRDSLL GGDGDDTLYG GGGNDLLLGG AGDDVLDGGE GSNRLEGGAG NDVLKVSYWS
ADNVLNGGTG DDTLYGSAFA DTYLFNKGDG HDTIIEQSGD DKLVFGEGIA AADVRLLRQG
QDVVLDLGNG HDSIRLKDWL TSNGTRNHSA DIEQIVFADG TLWTPETLSS MGLTTLGTSG
NDTLKGWQGK DILLGGDGDD VLDGGEGSNR LEGGAGNDVL KVSYWSADNV LNGGSGDDTL
YGSAFADTYL FNKGDGHDTI IEQSGDDKLV FGEGIAAADV RLLRQGQDVV LDLGNGHDSI
RLKDWLTAEG RRNYSADIEQ IVFADGTLWT PETLSSMGLI TLGTLGNDTL KGWQGKDILL
GGAGDDVLDG GEGSNRLEGG AGNDVLKVSY WSADNVLNGG TGDDTLYGSA FADTYLFNQG
DGHDTIIEQS GDDKLVFGEG LHREEACFTR SGDDLSILFN GSEDQVTVAG WFSAAAHQVE
SLVFQDGTVL SGEVERLIAA MALSPAVTTT QASVRDHKEL PRLVASSIV
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