| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1340 |
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| Symbol | |
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| ID | 6203904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1478363 |
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| End bp | 1479604 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641702859 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001830032 |
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| Protein GI | 182681872 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.159876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCGA CGAAAACTTC TTTTCCCAAA CAAGACATCC GAATTTTGCT GCTAGAAGGG
GTCAGTCACA GCGGGATCGA AACGTTCCGT GCGGCGGGTT ACTCGCAGAT CAAGATCCAT
ACGACATCGC TGCCGGAAGA GGCTCTGCAA GCAGAGATTG CGGAAGCGCA CATCATCGGT
ATTCGCTCGC GCACTCAATT GAATGCAGCG GTGCTAGGGC ATGCCAAACG TCTGATGGCC
ATAGGTTGTT TCTGCATCGG GACGAATCAG GTGGACTTGG ATACGGCGGA ATTGAGCGGG
ATCCCCGTGT TCAACGCGCC ATATTCCAAT ACGCGTAGTG TGGCTGAGCT GATCATTGCG
GAAGCAATTT TGTTGCTACG CAGGATCCCG CAGAAAAATG CCGAATGCCA TCGTGGGGGC
TGGTCCAAAT CTGCCATCAA TAGTCATGAA GCACGCGGTA AGGTGTTGGG CATCGTGGGA
TACGGTCACA TCGGTACGCA AGTCAGTGTG CTGGCGGAGG CGATGGGGAT GCAGGTGATT
TTCTACGATA TTGAATCCAA GCTCTCTTTG GGCAATGCGC GTCCAGCGGC AAGCTTGGAT
GAGTTGCTCG GCATTGCCGA CGTAGTGACG CTGCATGTAC CGGAAACGGC AGCGACCAAG
AATATGCTTG GTCATGCAGA ATTGGCACGA ATGAAACCGG GGGCGCATTT GATTAATGCA
TCGCGCGGTA CGGTTGTGGA GATTGACGCG CTGGATGCGG CTCTGGTGTC GGGGCATCTG
GGCGGGGCGG CAGTGGATGT ATTCCCAAGC GAACCCAAGG GCAATAGTGA TCCGTTCATC
TCGCCATTGA GCAGGCACGA CAATGTGATT TTGACGCCAC ATATTGGGGG CAGCACGCTA
GAAGCGCAGG ACAATATTGG GATTGAGGTG GCAGCCAAAT TGATCCGTTA TAGCGATAAC
GGCAGCACGC TATCGGCGGT GAATTTCCCT GAAGTCAGTT TGCCGGAGCA CGTGGGGAGT
ATGCGTTTGC TGCATATCCA CCGTAATGTG CCCGGGGTGC TGTCGCATAT CAACGAGCTG
TTCTCGCGTC ACAACGTCAA TATTGATGGT CAGTTCCTGC GTACCGATGC CACGTTGGGC
TATGTGGTCA TTGATATCGG TGCCAGTCAG ACGCAGGCTC TGGCATTAAA AGAGGCATTG
ACGCAGGTTC CCGGAACGCT GCGTACCCGT CTGCTGTACT GA
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| Protein sequence | MPPTKTSFPK QDIRILLLEG VSHSGIETFR AAGYSQIKIH TTSLPEEALQ AEIAEAHIIG
IRSRTQLNAA VLGHAKRLMA IGCFCIGTNQ VDLDTAELSG IPVFNAPYSN TRSVAELIIA
EAILLLRRIP QKNAECHRGG WSKSAINSHE ARGKVLGIVG YGHIGTQVSV LAEAMGMQVI
FYDIESKLSL GNARPAASLD ELLGIADVVT LHVPETAATK NMLGHAELAR MKPGAHLINA
SRGTVVEIDA LDAALVSGHL GGAAVDVFPS EPKGNSDPFI SPLSRHDNVI LTPHIGGSTL
EAQDNIGIEV AAKLIRYSDN GSTLSAVNFP EVSLPEHVGS MRLLHIHRNV PGVLSHINEL
FSRHNVNIDG QFLRTDATLG YVVIDIGASQ TQALALKEAL TQVPGTLRTR LLY
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