Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1180 |
Symbol | |
ID | 6202346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1319718 |
End bp | 1322249 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641702708 |
Product | P4 family phage/plasmid primase |
Protein accession | YP_001829882 |
Protein GI | 182681722 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000898776 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATT CTATCACGGT TCTAAAACAC CCCGTAAATA CCCTCGCCAA AACATGGTGC GCTGATGGCT CGGTGAAAGC CTACGACAAC GCCAAGTTCT TCCAGGTGGA GCAACGAGCG CTCAACAATA GCCGCGAGCT GTCAGCACTT CTCACGGAGC TGGAGCAGAA CCCGCATGCC TGCGTGATTC GCGGGGCGTA TGTGGGCGAT GCCAAAGCCG CTGCGCTTGA TACTGAGTTC CAGAAAGGAA AAGTACGGCG CATTGCCGAG CTGTACGAGG ATATCCCGCA TCACTGGATG CTCGTTGAGA TTGATAATTT CGATCCGGTG CGCCGCGATC CGGTGGCCGA TCCGGTGGGG AGCATCGGCG AGTTCCTCCA CGCACATCTT CCCTTTGGCT TCCACGGCGC AGATTACCAT TGGCAGTTAT CCAGTAGCGC GGGGCGTCCT GAGTGCGCAG GGAAGCTAAA AGCCCATGTG TGGTTTTGGC TACATAAGCC GTACACCAGC GCACAGCTCA AAGCCTGGGC CGCTGTCTGC GCTCCAGGGC TGGACGCTTC TGTATTTAAT ACGGTGCAAA TCCACTACAC CGCCGCCCCT GTGTTTGAAG CCGGTGTGGC CGATCCAGTT CCAGTGCGTA GCGGCTTTGT GGAAGGCATT CTTGAGGATT CTGTATTGCT GGAGATTGAT GCGGCGATCC TGGAAAGCGC CAAGACTGAA GGCAAACCCA GCCGCCAACA CAAGCTCATG GCCGCGGCTG CCAACGACCC TGTGGCTGTG CGCCTTGAAG AACGCGGGTT TATCTTATCG ACCGGTAAGG CGGGTGAACT CTTTATCGAA TGCCCCTTGG CTAAGCAGCA TACGCAAGCC TCTAGCCCCA CAGCCACCGT GTATTACCCA GCACATACCG GAGGTTATGC CAATGGCGCG TTTGTATGCC AGCACGCCCA CTGTCGCGGG GTGCCGCAAT CGGCGTTTCT ACATGAAATA GGAGTCTATT CCGATGAGGA AATGCTAGCC ATGTTCGAGG ACCTCACGGA CGAGCCTGCC ACGCTTGCCG TTGAGCGGCA CGACGTGCCC GAAGCGCTGT ACCTAACCAC TGACACAGCG AACGCAGTGC GGATTGCCAA GCACTACGGC AAACGGCTGA TGGTGTCTGC TGAGCGCTGG TTCGTCTGGG AAGGCACCCA CTGGGCGCAT GGTATGGATG CGGCGCGCCT GTTGGCGTTA AAACTCTCCA AAATCATTCG CGGCGAAGTG GAGCAATGGC GCACCAAGCG AGCGGACACG GAGAAGGAAA AAAGCAAAAA CGCAAAGATC GCTGCTGCGC TGGAGGCATG GGGCAAGAAG TCGGAAATGC GCAGCACTGT AGAGGCGGCG ATGGCGCTAG CCAAAAGTAT GTTGGTCGTG AAAGCGGAAC GGCTGGACAC GGACCCCTGG TTGTTGAACT GCGCCAATGG CACCGTGGAC CTGCGTACCG GAACGCTTAA AGCGCATCGC CCCGAGGATT ACATTACGCG GGTTGTCCCC GTTAACTACA CACCCGATGC CGCTGCACCT GTCTTTAAAA AGACACTGGC GCGCATCACC TGTGAAGAAG GGCAGGCCCA GCAGCCGCTC AGTGACTTTC TGCAACGCTG GTTCGGGTAC TGCGCCACCG GCTCGGTGCG TGAGCATAAG ATGGCCGTGA TGTACGGGAT GGGCCGTAAC GGGAAAAGTA CGCTACTGGA CCTGATCTCA GGGATTCTCG GCAGTTATGC AGGTGTGGCC GCCCCTGGGC TGCTGATGGA CGGAGGCCAC GACCGACACC CAACCGAGAT TGCCGATCTG GCGGGACGGC GCATGATGAC GGTGAATGAA ACCAGCGAAG GTGGCATCTT GCGCGAAGGC TTCGTAAAGC AGGCCACCGG AGGGGATTCA CTCAAGGCCC GTCATATGCG TAGTGACTTC TTCGAGTTCC AGCCCACGCA CAAGCTGCAA TTACTCACTA ACCATAAGCC TGTCATCAAG GGGCAGGACG TGGGCATCTG GAGTCGCCTA ATGCTCATCC CGTTTAAAGC GCGCTTCGGC ACCGCTGAAG AAATTGAGGC GGGGGCCGCC CAATACCCCA TAGACCATAA AATCACTGAG AAGCTGGCCG CTGAACGAGA AGGGGTGTTG GCCTGGCTCG TGGCAGGGGC TGTGGAGTGG TGCAAGAACG GGCTGAACCC TCCGGAGATT GTGAGGGACG CTTCAAAGGA CTACCAGACG GAGCAGGACC GCATTGCCCA GTTCATTGAG GAAGAATGCG TATTAGGGAT GGAACACGAG GAGAAACTAA CCGCTCCGAT GGGCGGTGGG TTATACCCCG CGTATACGCA ATGGTGCAAA GACAGCGGTG TTTACCCACT GTCCAAAACC CGTTTTCTTG GCGAGCTGGA ACGGTGCGTG CCGAAATTCA GGAAAAAGCA TATATACGAA ACCCCTGAGG GGGGAAAGCG CCGGATGTTT CTAGCTATTC AAGGTATCGC GTTGGCGGAC GCTGACCTGT AA
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Protein sequence | MRDSITVLKH PVNTLAKTWC ADGSVKAYDN AKFFQVEQRA LNNSRELSAL LTELEQNPHA CVIRGAYVGD AKAAALDTEF QKGKVRRIAE LYEDIPHHWM LVEIDNFDPV RRDPVADPVG SIGEFLHAHL PFGFHGADYH WQLSSSAGRP ECAGKLKAHV WFWLHKPYTS AQLKAWAAVC APGLDASVFN TVQIHYTAAP VFEAGVADPV PVRSGFVEGI LEDSVLLEID AAILESAKTE GKPSRQHKLM AAAANDPVAV RLEERGFILS TGKAGELFIE CPLAKQHTQA SSPTATVYYP AHTGGYANGA FVCQHAHCRG VPQSAFLHEI GVYSDEEMLA MFEDLTDEPA TLAVERHDVP EALYLTTDTA NAVRIAKHYG KRLMVSAERW FVWEGTHWAH GMDAARLLAL KLSKIIRGEV EQWRTKRADT EKEKSKNAKI AAALEAWGKK SEMRSTVEAA MALAKSMLVV KAERLDTDPW LLNCANGTVD LRTGTLKAHR PEDYITRVVP VNYTPDAAAP VFKKTLARIT CEEGQAQQPL SDFLQRWFGY CATGSVREHK MAVMYGMGRN GKSTLLDLIS GILGSYAGVA APGLLMDGGH DRHPTEIADL AGRRMMTVNE TSEGGILREG FVKQATGGDS LKARHMRSDF FEFQPTHKLQ LLTNHKPVIK GQDVGIWSRL MLIPFKARFG TAEEIEAGAA QYPIDHKITE KLAAEREGVL AWLVAGAVEW CKNGLNPPEI VRDASKDYQT EQDRIAQFIE EECVLGMEHE EKLTAPMGGG LYPAYTQWCK DSGVYPLSKT RFLGELERCV PKFRKKHIYE TPEGGKRRMF LAIQGIALAD ADL
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