Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1000 |
Symbol | |
ID | 6203555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1155253 |
End bp | 1156845 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641702527 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
Protein accession | YP_001829705 |
Protein GI | 182681545 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.362033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATCC TATGGCTGAT GTATTCAGGG GGATTACAAT GGCAACGTTT TTTAGTCAGC CATAAGGGCC AGCCGGTGTC ATTGATCAAA CAAGAAGACT TTATCCAGTC CATCGCTGAT GCGCTGCAAT ACATCAGTTA CTACCATCCG GTCGATTACA TCAAGAATCT GGCTTTGGCG TATGGGTGCG AGAAATCGCC CGCCGCTAAA GATGCAATGG CGCAGATTTT GATTAACTCA CGTATGTGTG CTGAGGGGCG CCGCCCGATT TGCCAAGATA CAGGGATTGT CACGGTGTTC CTTAGCATCG GGATGGATGT ACGTTGGGAT GACGTCACGA TGGATGTGGA AGAGATGGTG AATGAGGGGG TTCGCCGTGC CTATCGTCAT CCGGATAACA CGCTACGTGC GTCTGTGCTT GCTGATCCTG CCGGCAAGCG CTGCAATACG AGGGACAATA CGCCAGCAGT CGTTAACGTC AAGGTTGTTT CTGGGGGCCA TGTTGAAGTG ATTGTTGCTG CCAAGGGAGG GGGATCTGAG GCCAAGAGCA AATTTGCAAT GCTAAATCCA TCGGATTCCA TCGTTGATTG GGTTCTGGAC ACTGTGCCAA CCATGGGGGC TGGCTGGTGC CCACCAGGGA TGCTTGGGAT TGGTATCGGT GGTACGGCTG AGAAAGCGAT GCTGCTCGCT AAGGAAGCGT TGATGGAACC GATTGACATC CAGGATTTGA TGGTACGCGG CCCTTCCAAT CGTGCTGAAG AATTACGCTT GGAGTTGTAC GAGAAGGTCA ATGCTTTAGG GATCGGTGCT CAGGGGGTGG GCGGTTTGAC GACGGTATTA GATATCAAGG TCAAAGATTA TCCAACGCAT GCTGCCAATT TGCCGGTAGC GATGATCCCT AATTGTGCGT CCACACGCCA TGCGCATTTC ACATTGGACG GTAGCGGTCC TGTTGTTCTG GAACCGCCGT CATTAGAGGA TTGGCCTAAG TTGAGCTATC TCCCGGAGTC TGCACGGCAG GTGGATTTGA ATACGATCAC CAGGGATGAG GTGGCGCAGT TCAAGCCAGG TGAGGTGTTG CTACTCAGCG GCAAATTGTT GACGGGACGA GATGCTGCGC ATAAGCGCAT CGTTGAGATG CTCAACAAGG GGGAGACATT ACCAGTTGAT TTCACGAATC GCTTTATCTA CTACGTGGGT CCAGTGGATC CTGTGCGTGA TGAAGTCGTC GGTCCTGCGG GTCCAACCAC AGCAACGCGT ATGGATAAGT TTACGCGTCA GATGCTGGAG CAGGGCGGGT TGCTCGGTAT GGTGGGCAAG GCCGAGCGTG GTCCTACTGC CATCGCTGCA ATCCGTGACA ACAAAGCCGT GTATCTGATG GCGGTGGGAG GGGCGGCTTA TCTTGTCTCC AAGGCGATCA AAACGAGCCG GATACTGGCT TTTGAAGACC TTGGCATGGA GGCAATTTAT GAGTTTGAAG TCAAGGAGAT GCCTGTAACA GTGGCGGTTG ATTGCAACGG TGAGTCGATA CATACAACTG GGCCGCGTGA GTGGCGAAGC CGGATCGGGA AAATTCCGGT TGTTGTGGAG TAG
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Protein sequence | MFILWLMYSG GLQWQRFLVS HKGQPVSLIK QEDFIQSIAD ALQYISYYHP VDYIKNLALA YGCEKSPAAK DAMAQILINS RMCAEGRRPI CQDTGIVTVF LSIGMDVRWD DVTMDVEEMV NEGVRRAYRH PDNTLRASVL ADPAGKRCNT RDNTPAVVNV KVVSGGHVEV IVAAKGGGSE AKSKFAMLNP SDSIVDWVLD TVPTMGAGWC PPGMLGIGIG GTAEKAMLLA KEALMEPIDI QDLMVRGPSN RAEELRLELY EKVNALGIGA QGVGGLTTVL DIKVKDYPTH AANLPVAMIP NCASTRHAHF TLDGSGPVVL EPPSLEDWPK LSYLPESARQ VDLNTITRDE VAQFKPGEVL LLSGKLLTGR DAAHKRIVEM LNKGETLPVD FTNRFIYYVG PVDPVRDEVV GPAGPTTATR MDKFTRQMLE QGGLLGMVGK AERGPTAIAA IRDNKAVYLM AVGGAAYLVS KAIKTSRILA FEDLGMEAIY EFEVKEMPVT VAVDCNGESI HTTGPREWRS RIGKIPVVVE
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