| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0958 |
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| Symbol | |
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| ID | 6202926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1122758 |
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| End bp | 1124614 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641702485 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001829664 |
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| Protein GI | 182681504 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.267449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCGCC GCCGCTTCGT CCCGTCACTC TCTGGACGAA CCATCGTGAA CATCACCACT
GCCCTCCCCC TTCCCACCCA CTTGCTGTCG GAGAAGGTGA CTGCACCTTT ACTTGGCGCA
CGCAAAATTT ACGTTACCGG ATCACGCCAA GATATACGTG TGCCAATGCG CGAAATCGCA
CTCACACCCA GCTCAGCTCG ATACGGCGGA AACGAGAATC TATCACTGGT GCTCTATGAC
ACTTCGGGAA TTTACACTGA TCCGCAAGCT ACGATTGACT TAGCGTGTGG TCTACCTCGA
TTACGCACTG CTTGGATTGA TGAGCGTGCC GATACCGTAG AAGCTAAGTT GCATTTCAAA
GTACCTGAGT CGGTATCTGT CACCGCACCG CCTTTTCCTA CACCGCCACA GCCACTGCGT
GCACGTGACA ATGTCGCGGT AACGCAACTG GAATATGCAC GACGTGGTCT CGTCACTCCA
GAAATGGAGT TTGTCGCTAT CCGTGAGCAA CAACGCCGTG AACAAACTGT CGAAAATCTT
CGCGGCCAGC GCCATGCGGG TGATGCCTGG GGGGCTTTGG TTGGCACACC CATCACTCCT
GAATTCGTAC GTGATGAAAT CGCGCGTGGC CGGGCCATTC TTCCTAATAA CATCAACCAT
CCTGAAAGCG AGCCAATGAT TATTGGCCGC AACTTTTTGA CAAAAATCAA TGCCAATATT
GGAACATCAG CCCTGTCTTC CAGTATTGCC GAAGAAGTGG AGAAGCTGGT TTGGGCGATC
CGCTGGGGCG CAGACACAAT CATGGACCTC TCTACTGGCC GTGACATCCA TGCTACTAGA
GAATGGATTC TGCGTAATTC ACCTGTTCCT GTGGGGACGG TGCCAATTTA TCAAGCGTTG
GAGAAAGTCG ATGGACATGT TGATGCTCTG AGTTGGGACG TGTTTCGTGA CACTTTGATC
GAACAGGCCG AACAAGGTGT GGACTATGTC ACCGTGCATG CAGGAGTCCT TCGAGACTTT
ATCCCACTGA CTGCTTCACG TTTAACAGGA ATCGTCTCGC GTGGCGGTTC CATCATGGCT
AGATGGTGTC AGGCACACCG CAGCGAAAAC TTCCTATACA CGCATTTCGA GGAACTCTGT
GAAATCATGC GTGCCTACGA CGTGGCATTC TCTCTGGGTG ATGGATTGCG CCCAGGCTGC
ATCGCTGATG CGAATGATGC AGCTCAATTT GCTGAATTGG AGATTCTTGG CAAGTTGACC
CACATCGCCT GGAATCACCA AGTACAGGTG ATGGTAGAAG GTCCTGGACA CGTCCCAATG
CAGCTAATCA AGGCCAATAT GGATAAGCAA TTAGCCGCCT GTGGTGAGGC ACCTTTCTAC
ACGCTAGGTC CATTAACTAC AGATATCGCC CCAGGTTACG ACCACATTAC TAGTGCAATT
GGCGCGGCAA TGATCGGCTG GTATGGGACA GCGATGCTAT GTTACGTGAC TCCCAAGGAG
CACCTTGGCC TGCCTAATTT GCAAGATGTC CATGATGGCA TCATCGCCTA CAAAATTGCG
GCACATGCGG CTGATCTTGC CAAAGGGCAT CCAGCGGCAC AGGCACGTGA CGATGCACTC
TCTAAAGCAC GCTTTGAATT CCGCTGGCAA GATCAATTCC ATCTCAGCTT GGATCCAGAA
AAAGCACTGG CACTGCATGA TGAGAGCCTC CCTAAAGAAG CGCATAAACG AGCAGCATTC
TGTTCGATGT GCGGACCGCA ATTTTGTTCA ATGAAAATCT CTCAAGAGGT CCGTGACGCT
TCCTCCAGCG AATTGTCAGA TGCAAATACG GATATCAATA CCAGCGACGG CATCTAG
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| Protein sequence | MPRRRFVPSL SGRTIVNITT ALPLPTHLLS EKVTAPLLGA RKIYVTGSRQ DIRVPMREIA
LTPSSARYGG NENLSLVLYD TSGIYTDPQA TIDLACGLPR LRTAWIDERA DTVEAKLHFK
VPESVSVTAP PFPTPPQPLR ARDNVAVTQL EYARRGLVTP EMEFVAIREQ QRREQTVENL
RGQRHAGDAW GALVGTPITP EFVRDEIARG RAILPNNINH PESEPMIIGR NFLTKINANI
GTSALSSSIA EEVEKLVWAI RWGADTIMDL STGRDIHATR EWILRNSPVP VGTVPIYQAL
EKVDGHVDAL SWDVFRDTLI EQAEQGVDYV TVHAGVLRDF IPLTASRLTG IVSRGGSIMA
RWCQAHRSEN FLYTHFEELC EIMRAYDVAF SLGDGLRPGC IADANDAAQF AELEILGKLT
HIAWNHQVQV MVEGPGHVPM QLIKANMDKQ LAACGEAPFY TLGPLTTDIA PGYDHITSAI
GAAMIGWYGT AMLCYVTPKE HLGLPNLQDV HDGIIAYKIA AHAADLAKGH PAAQARDDAL
SKARFEFRWQ DQFHLSLDPE KALALHDESL PKEAHKRAAF CSMCGPQFCS MKISQEVRDA
SSSELSDANT DINTSDGI
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