Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0896 |
Symbol | |
ID | 6203435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1060631 |
End bp | 1065808 |
Gene Length | 5178 bp |
Protein Length | 1725 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641702426 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001829605 |
Protein GI | 182681445 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.720203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAC TTCGTGATGC GATGAGCCAT GCTGTGCTTG GCTGGGTAAA GCCTGATCTA GATGAAGCTT TGGGCCAAGC ACGCCAGGAG ATTGAGTTAT TCGTTGAGAA CCCTGTAGAC ACTAGTCGGA TACTTTCTTG CGCTGATTAC CTGCATCAGG TGCAGGGTAC CTTGCGAATG CTTGAATTAT ATGCTCCCGC AATGGTGGCC GAGGAAATGG AACGGCTAGC TAAGGTGATG CAAGTCGATG GAGTCAATGA TCGCGAGGAA GCCTGTGCAG TACTGATGCG CGGCACTCTA TTGCTGCCTG ATTACCTGGA ACGCTTGCAG AACGGTCATC GTGATATTCC AATTGTTCTT CTGCCTCTGC TTAACGAGAT CCGTGCTGCG CGTGGCGAAT CAAGATTGAA TGAGAATGTG TTATTTGCTT TCGACCCTGA GGTGCGCAAT GCCACTGAGG TTGAACTTGA TCATGCACGT AGCAGTCTGA CTGGATGTAA TCGCCAACTG TTGGATACAG CTGCCAGTGC AGTCAAGGAA GAGTTGCTCC GAGTCAAAGA AGCTTTGGAT CTGTATCTGC GTATCGGTGG CGATGTTACT GATTTAAGGA CGCAGATTAC CGTACTGAGT AGTGTTGCTG ATACTTTAGC AATGATGGGT TTGGGCATGG CTGGCAGCTT GGTCCTGCAA CAGCGTGATG CGTTATTGCG TATTGTTGAA TCTGATGAGA AAGCTGATGA GGCGCTGTTG TTGGAGATCG CTGGCGCATT GCTCCATGTC GATGCTTCCT TGGACAACCA AGTCGCCAAC TTGGGTGCAG AGACTGATGC GGATGTGGTT CTGGCAAACG CAGAAACACG TCGGACGTTA GATGTTCTGG CGCATGAGGC GATTAGCAAT TTTACTGCAG CCCGTGAATG CTTTATTGCT TTCATTGAGA GTAATTGGGA CCAAGCGCGC TTGCTTAAGG TCCCAGGTTT GCTCAGCGAA GTTGGCGGTG CGTTGTCAAT TCTTGAGTTG TCACAAGCTG CAAGCTATCT GGAGGGTGTA CGCCGTTATA TCGAGTGTGA GCTAATTACC AAGCGTCGTG TGCCTGCTGC TCGTCAGCTG GACACTCTGG CTGATGCGAT GGCCAGTTTG GAATACTACT TAGAAGCGTT GCGTGAGAGA CGTCCTGGAC GTGAGGACAT ACTCGAAATC ACACGTAACA GTCTGGAAGC ACTCTCTTAC TGGCCCATCC CTGCTGAAGA GGGGGATAGC GTTGGTTCCC AACAGAGTAC AGATGTGCTG ACTTTATCTG CTGTGGCTAC AGAATCTATG TCACCTAACG AAGCGCTACC AGAACTGACT GTGGTTGAAG ATGGAACGGT TACCTTTCAG GAGGCGGTAT CAGAATTACT TACATTAGTT GAGCCAGAAA GCGCCGACAT CTTCGACGCA TCGCTGGGGG AGCCGATGCA GCCCATTGTT ACTGATCTAT ACGAAGGAGA TCGACGCAGC GAGTTGCCCA CTGAATCCAT GCCTGACGAT GAGACGGTTA TCCAAAGTAT ACCTACTGTT GTTGCACCGC TATCGTCTGG AGGTTTCGAA GATGATGTTG GGGTGATTAT CGACAGTGAT ATCCGGGATG TATTTCTTGA GGAGCTTGAT GAAGAGCAGG GTAATCTACG GCGCTTGCTG ACGATCTGGG GTACTGCGCC GGATGACATG GACAGTTTGC GTCAGATCCG TCGTGTGTTT CATACCCTCA AAGGAAGTGG CCGATTGGTT GGGGCTCTCA CCTTGGGTCA TTTTGCGTGG AAGATCGAGA ACCTGATTAA TCGTGTCCTG GATGGTTCAC GTGCAGCGAG TCCGGCTGTT GTCGCACTGG TCGAACGTGC CTGTGAAGTG GTACTTCCGG AGATGAATGC CGCTTTACGT GGTAAGGCTT CGATCAGCAC TGATTTAGAA GCAACTCAGG CGCTGATTGA TTTGGTTGCA TCAGGTGAGG AGGCGTTCTA TACGTCGCCA GATAGCATTG CTGACGACTC AGCCACATTA AAGTTGGTAC CTCAGCTGAT TGAGGGGGGC GCGCCTTTTT TCGTGGACAG TGTACTGCGT GAAATCCTTG AAGCCGAGAT TGCTAACCAT TTGGATACTA TCAAGGATTG GTTAAATACT GCTGCTGGCC AATCTTACTC AGTCAACGAG TCATTACTAC GTGCCGTACA CACGTTGAAT GGTGCTTTCG CTATGACTAA GATGCCGGAA ATTACCCAGG TTATGCAGTC TGCGGAGACT TATATTAAGC GCCTGCTTAC TAAGCACCAA AAAGCAAGCG TTGAAGGGGT GGGTGTGTTA TCGGCAATGG CAACAGCGAT TGCCGATACC TTGACTGCGT TGCGGAGTGA TTCACCGCGT ATTCCTTCGT TTGTGTCTTT GGTCTCATGC TTGTCTGAAT TAGTGACGAC AATGCCTGAT GGTGGCCAGT CGCAACAGCA GTACTTTGAA AGTGTGGCAG AACAAAACCT TGAAAGTGTC CCGGAGCAAA CACAGGATGT GTCGCTAAGT AACGATGTAT TGACTGATGT ATACGATTTA AGTGTTAACT TGGATGTGCT TGAGCCATTA AGTGCTGTAG TCGAGCCAGA AAAGCATATT GTTGATAGAC CTCAGCATGA GGTAGCGCAT CAATACAACA ATGTGGCCGC ATCGACAATG AGTGATGTGG TGGCAGCTGA CAGCAACTTA GATGTAGCAG CACATCAATA CGACCTTGTT TCTGGTAACG AGTCACCTGC TGATGAACTT GGGTTGCTGG CTTTTGATGA ACCAGCTTTT GAGTTGGTCG ATCTCTTCGT TGAGGAGAGT AGCGACCTGC TTGACCATTG TGACAATTTA TTAGCAAAGC TGCATGAAGC TCCACAAGAC CGTGAGTTAT TGGTTGGTTT ACAACGTGAC TTGCATACGC TTAAGGGCGG AGCACGTATG GCTGGGATCA ATGCGATTGG TGATCTGGGT CATAGCATTG AATCGATGTT GGAATCAGTC ATGGCTGATT ACATTATGCT CAATCGTGAT GATATGCGCT TGCTGGAATA CAGCTTTGAT TATTTGCATC AGATGTTGAC ACAGACGCGC CAACATCGCG TTGTGACAAT GCCCAGCGAT CTGGTCGCAA CTCTCAAAGC ACGTACACAG GGTGCTACGC ATGATGGCAT GTCAAACTTT GGTGAGGTTG CCGAGCTTTC CTTAATTGCT GATGTTTCTT CAAATACTCT TCTTGATAAA GAATCACAGG TTCTTCCAGA TACGCCTGCC ATACTCCCTC CGCTGTCGTT GCCAATCCCT TTGGAAGGTC AAGACGAGGA CAGCTCTCTG GAACGTTTGG TTCAGGAGCA GGTACGCGTA CGTGCTGATC TTCTTGATCG CTTGGTCAAC CATGCTGGCG AAGTTGCTAT CTATCGTTCG CAGTTGGAGC AGCGTTTAAG TGCTTTCCGT AATGCGATGT CTGAGTTGGG TCGTACCAAC ACGCGTCTGC GCGATCAGTT ACGTCGACTT GATTTGGAAA CTGAAGCGCA GATTGTAGCG CGTTACCAAC ACGAAAAAAG CCTAGTTTCA CGTGACTTCG ATCCATTGGA ATTGGACCGT TTTTCCACTT TGCAACAACT CAGTCGTGCG TTAAACGAAT CTGCAGCTGA TTTGACGGGT CTACAAGGGG TACTCGACGA GCTGGCACGT CAATACGATG GCCTACTTCA GCAGCAATTT CGGGTTAGCT CAGAGTTACA AGATGGGCTG ATGCGTGCAC GCATGGTGCC TTTCAATAGC ATCTTGCCGC GTTTGCGTCG TGTGGTGCGT CAAGCTGAAG CCGATACTAA CAAGCATGTG CATTTAGTGC TGGAAGGTAC TCACGGTGAG TTGGATCGCA ACGTGATAGA TCGTATGGTA GCGCCATTAG AACACATGCT GCGCAATGCG GTAGCACACG GTCTTGAGAT GCCTGAGAAA CGCCGCGCTG CTGGAAAAGC TGATGAGGGT AAGATCACGA TTCAGCTGCA ACGCGAAGGT TCTGAAATCC TGTTAAAGGT TTCCGACGAT GGAGCTGGTT TGGATCGAGA TGCGATTCAG CGTCGTGCCA AGCAGCGTGG TTTGATTCCG ATAGATGTCA ATCTTAGTGA TGCAGAGTTG GATGGAATTA TTTTCACCTC TGGGTTCACT ACTTATGATG AGGTTAATCA GCTTGCTGGT CGTGGCGTTG GTATGGATGT CGTACGTAGC GAAGTGAGTC AGCTCGGTGG TTCGGTTAGC ATCAACTCAG TACGCGGTCA CGGCGTAACC TTCACTCTGC GTCTACCGCA GACACTAGCT GTGACCCAGG CAGTATTCAT TCGGATTGGT CAGAGCACCT TTGCAGTTCC GGTGGCTTCA GTGATTGGTA TCGGACGGAT TGCACATGAG CGCTACAAAT CTGACCATGA AAGCTACCAT TACGATGGAG AACAGTACGT ATTGTATGAC CTAGGTTTCC TGATTGGGCA GCCTGGAATT CATGCTGATC GCCAACAGGT GCCATTATTA TTGGTGCGCA CTGGTGATTT GCGCGTTGCA GTAGCAGTCG ACGAGGTGCT TGGCAATCGG GAAATTGTGG TCAAACCGGT TGGATTGCAG ATCGCTTCGG TACCAGGGAT CTATGGAGCT ACGATCACTG GTGATGGTTG TGTGATTGTT ATTCTGGATT TAGCGCCTTT GGTGCGTCGC TATTTAAATC AGCCGATACA TTTGGAGGTT GAAGAAGCAC CGGTTACTCA GTCTCAGATG CCATTGGTCA TGGTAGTCGA TGATTCGCTC ACCATGCGTA AGGTAACTAG CCGCGTATTG GAACGCCATA ACTTCAGTGT TAGCGTTGCT CGCGATGGTA TTGAAGCACT GGAACTGCTT GAAGAACGCA TCCCAGACTT GATGTTGTTG GACATTGAGA TGCCACGCAT GGATGGTTAC GAACTAGTCG CTGCTATGCG CGCTGATGAT CGCTTCAAGA GTATACCTAT TCTAATGATT ACCTCTCGCA GCGGTGACAA ACATCGTCAA CGTGCCTTTG AAATTGGTGT GCAGCGCTAT CTTGGGAAAC CTTACCAAGA ATTTGATTTG ATGAAAAATG TATATGATTT ATTAGGGGTT GTTCGTGTCC GAGAATGA
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Protein sequence | MNALRDAMSH AVLGWVKPDL DEALGQARQE IELFVENPVD TSRILSCADY LHQVQGTLRM LELYAPAMVA EEMERLAKVM QVDGVNDREE ACAVLMRGTL LLPDYLERLQ NGHRDIPIVL LPLLNEIRAA RGESRLNENV LFAFDPEVRN ATEVELDHAR SSLTGCNRQL LDTAASAVKE ELLRVKEALD LYLRIGGDVT DLRTQITVLS SVADTLAMMG LGMAGSLVLQ QRDALLRIVE SDEKADEALL LEIAGALLHV DASLDNQVAN LGAETDADVV LANAETRRTL DVLAHEAISN FTAARECFIA FIESNWDQAR LLKVPGLLSE VGGALSILEL SQAASYLEGV RRYIECELIT KRRVPAARQL DTLADAMASL EYYLEALRER RPGREDILEI TRNSLEALSY WPIPAEEGDS VGSQQSTDVL TLSAVATESM SPNEALPELT VVEDGTVTFQ EAVSELLTLV EPESADIFDA SLGEPMQPIV TDLYEGDRRS ELPTESMPDD ETVIQSIPTV VAPLSSGGFE DDVGVIIDSD IRDVFLEELD EEQGNLRRLL TIWGTAPDDM DSLRQIRRVF HTLKGSGRLV GALTLGHFAW KIENLINRVL DGSRAASPAV VALVERACEV VLPEMNAALR GKASISTDLE ATQALIDLVA SGEEAFYTSP DSIADDSATL KLVPQLIEGG APFFVDSVLR EILEAEIANH LDTIKDWLNT AAGQSYSVNE SLLRAVHTLN GAFAMTKMPE ITQVMQSAET YIKRLLTKHQ KASVEGVGVL SAMATAIADT LTALRSDSPR IPSFVSLVSC LSELVTTMPD GGQSQQQYFE SVAEQNLESV PEQTQDVSLS NDVLTDVYDL SVNLDVLEPL SAVVEPEKHI VDRPQHEVAH QYNNVAASTM SDVVAADSNL DVAAHQYDLV SGNESPADEL GLLAFDEPAF ELVDLFVEES SDLLDHCDNL LAKLHEAPQD RELLVGLQRD LHTLKGGARM AGINAIGDLG HSIESMLESV MADYIMLNRD DMRLLEYSFD YLHQMLTQTR QHRVVTMPSD LVATLKARTQ GATHDGMSNF GEVAELSLIA DVSSNTLLDK ESQVLPDTPA ILPPLSLPIP LEGQDEDSSL ERLVQEQVRV RADLLDRLVN HAGEVAIYRS QLEQRLSAFR NAMSELGRTN TRLRDQLRRL DLETEAQIVA RYQHEKSLVS RDFDPLELDR FSTLQQLSRA LNESAADLTG LQGVLDELAR QYDGLLQQQF RVSSELQDGL MRARMVPFNS ILPRLRRVVR QAEADTNKHV HLVLEGTHGE LDRNVIDRMV APLEHMLRNA VAHGLEMPEK RRAAGKADEG KITIQLQREG SEILLKVSDD GAGLDRDAIQ RRAKQRGLIP IDVNLSDAEL DGIIFTSGFT TYDEVNQLAG RGVGMDVVRS EVSQLGGSVS INSVRGHGVT FTLRLPQTLA VTQAVFIRIG QSTFAVPVAS VIGIGRIAHE RYKSDHESYH YDGEQYVLYD LGFLIGQPGI HADRQQVPLL LVRTGDLRVA VAVDEVLGNR EIVVKPVGLQ IASVPGIYGA TITGDGCVIV ILDLAPLVRR YLNQPIHLEV EEAPVTQSQM PLVMVVDDSL TMRKVTSRVL ERHNFSVSVA RDGIEALELL EERIPDLMLL DIEMPRMDGY ELVAAMRADD RFKSIPILMI TSRSGDKHRQ RAFEIGVQRY LGKPYQEFDL MKNVYDLLGV VRVRE
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