Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0705 |
Symbol | |
ID | 6203439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 832348 |
End bp | 834258 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641702239 |
Product | hypothetical protein |
Protein accession | YP_001829420 |
Protein GI | 182681260 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCGTT TGTTGTTTTT TCTGCTATTG AGTCCTATTT GCATTGTTAC AGTTGCTGAT GCCAGGAATG CGCCTGCTGC TGCTCAAACG GACGGTAACT TCAGCTATCT GCGTTACCGT GCTGATTACG CAGTGCGGGC TGATGCGAGT AGCGTGCAGA CCAATGAATA CGATATCCGG CTCAACACCC AAGCGGCGGT AGAGCAGTTT AGCCAAGTGC GTCTTGGCTA TAGCGAGAAG ATGCAGAAGT TGGAGATCTT GGAAGCGTAT ACGATTACTG CTGCCGGAAT CCGCCAGGAT GTGGCTCCGA CAAAGATTTA CACCCAGGAG AGCTATTCCA GCGCTTCAGC GGCGATGTAC GCTGACTATA AGGTTAAAGT TGTGGTATTC CCCAATTTGG CACCGGGGGC GCGCGTGGTG TATCGCCTCC GGCGGACTCA GCTCACCCCT TACTTCCCAG GCTATTTCGG ATTTTGGGAG ACATTCAGTG TATTTACCCG GTATGACGAT GCAGTGGTGA CATTACGTGC GCCGCGCAAG CTGTCGATGC ACGTCTGGGT ACGTGGGGTG CATGGGTTCA CCCGACCGCG TTTTCAGGGT GACCAGGCTC GCTGGGAGTG GCGTTACCGG CGTAGTGTGC CGTTGCAGAG TCAGACGTGG AGTGCGGCCC AATGGGAATT TAGTCCGACG ATCATGGTGA GCACCTTCAA GGATTGGTCA CAGTTGGGTC ATGCTTATCA TGTCAAAGCA GGTAAAGCGG CCGTGGTCAC TCCGCGGGTG CGTGTTTTGG CCGATCAGAT CACTGCTGGT AGTGCCGGGC GTCGAGCACA GGCCACTGCA CTGTACAACT GGGTAGCGCG TAACATCCGC TATGTTGCGG TCTATCTTGG TAACGGTGGT TTAGAGCCAA ACAGGGCTGA TGTCATCCTC GAACAGCATT ACGGTGATTG CAAAGATCAT GCAGTCATTC TTGAGGCGTT GCTCGCAGCC AAAGGTATTC AAAGTACACC TGTTCTGATT GGTGCTGATG GTGGACCGAC ACTGCCACCG ATTGCGGTAC TCGGTCGTTT CAACCATGCC ATCAACTATG TGCCCGAGTT TAATCTTTAC CTTGATTCGA CAAATCCTTA CGCGCGCTTT GGTCAGCTTC CGGCCAGTGA CCTTGGGGTA CCGGTCGTGC ATAGCGCTGA CGGTTATGTG ACTCGTACAC CTCCCCATGA TGTATGGGCC AACACTTACG TGGCCCGCAC TGAATACCGC TTTGCCCAGG ATGGTAGTTT GAGTGGAGAG ACCATGCTGG ATCTGGGGTC GGATGGGGAA ATTGCGACAC GCGCAATGTT TGTCGAGCTT AATGCGCAGA ATCGGCGACG CATTGAGGAG AGCATCCTGG CTCAGTCCGG TTTTGATGGC GATGGGATGT TGGAGTTGCT GGGGATGCCG CAGGATCTAC AGTCTCCATT CAGTTACCGC TATCGGTTCT TGGCGCGCGA TTATGTTGAT TTTTCGATGG CCGGAGGGTT TGCGTTGCCT TACATGCCAG GCGCCGAGTC AGTGCGCAAC ATCTATACCA CTACGCCCGC TGAGACCAAC CAGACGCCGT TTTATTGCAA CGAAAGTTTG CATGAGGAGA CGTATGTACT GCGCTTTCCG GCGAACGTTC CGATTATTGC GATTCCTGGG AGTCACCGTT TTCGCAATCG TGCCGGGGAG TACAGCGTGG ATTGGTATCG CGACGGGCAG ACAATCACGG CCATGCACCG ATTACGTCAT CTAGCGTTGC GTGGTCCTGA GAAGCTCTGT TTACCGGGAG ATTATCAGGC GTTCCGTCAG CTTTACCAAC AGGTAAGACG TGGCTTTCGT GAGCAGGTCC TGTACGGTGA TTTGCGGCGC ATAGAGACCG TAGCGCATTG A
|
Protein sequence | MMRLLFFLLL SPICIVTVAD ARNAPAAAQT DGNFSYLRYR ADYAVRADAS SVQTNEYDIR LNTQAAVEQF SQVRLGYSEK MQKLEILEAY TITAAGIRQD VAPTKIYTQE SYSSASAAMY ADYKVKVVVF PNLAPGARVV YRLRRTQLTP YFPGYFGFWE TFSVFTRYDD AVVTLRAPRK LSMHVWVRGV HGFTRPRFQG DQARWEWRYR RSVPLQSQTW SAAQWEFSPT IMVSTFKDWS QLGHAYHVKA GKAAVVTPRV RVLADQITAG SAGRRAQATA LYNWVARNIR YVAVYLGNGG LEPNRADVIL EQHYGDCKDH AVILEALLAA KGIQSTPVLI GADGGPTLPP IAVLGRFNHA INYVPEFNLY LDSTNPYARF GQLPASDLGV PVVHSADGYV TRTPPHDVWA NTYVARTEYR FAQDGSLSGE TMLDLGSDGE IATRAMFVEL NAQNRRRIEE SILAQSGFDG DGMLELLGMP QDLQSPFSYR YRFLARDYVD FSMAGGFALP YMPGAESVRN IYTTTPAETN QTPFYCNESL HEETYVLRFP ANVPIIAIPG SHRFRNRAGE YSVDWYRDGQ TITAMHRLRH LALRGPEKLC LPGDYQAFRQ LYQQVRRGFR EQVLYGDLRR IETVAH
|
| |