Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0610 |
Symbol | aroB |
ID | 6203946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 722384 |
End bp | 723496 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641702147 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_001829328 |
Protein GI | 182681168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTC CCACACCACT GCGCAGCGTC ACCGTCAACA CCCCCCCCCC CTATACCATC GCCATTGGTC CCGGCCTATT GCACGATCCT CCACGCCTGG CCGCCACCAT CCGCGGCAGA CATGCACTCA TTCTCAGTGA TTCTGAAGTC GCCCCCCGTT ATGCCGCACA ACTGCATGAA ACGCTACTGC GCGCCCGTCC CGATCTACAC CTCAACGTAT TCACCCTGCC AGCCGGCGAA ACATCCAAGT CCCTAGAGAA CTTCGGCGCC GCAATCGCCC AACTCGCCAC ACTGGGCGCC ACGCGTGATG CCTGCCTCTT TGCACTCGGC GGCGGCGTCA TCGGGGATCT GGCCGGCTTT ACCGCCGCCT GCTGGATGCG TGGCATCGAC TACGTACAAG TGCCAACCAC CTTATTGGCG ATGGTCGACT CTTCCGTCGG CGGCAAAACC GCCGTAGACA TCCCCCAGGG TAAAAACATG GTCGGTGCCT TCCATCCGCC ACGTGCAGTG ATCGCCGATA CCGACACCCT TGCCACACTC CCGCTACGGG AACTACGCGC TGGTCTGAGC GAAGTCATCA AATACGGCGC AATCCGCGAC CCCGTATTCT TCCACTGGCT CCAAACCACA CGCGAAGCAC TTCTAGCACG TGACCCCGCC GCACTGGCCC AAGCAATCGC ACGTAGCTGC GAACACAAAG CCGATATTGT CGGACGTGAC CCACTGGAAA AAGGGGAACG CGTCCTGCTC AATCTCGGTC ATACCTTCGG CCACGCCATA GAAACAACAC AGGGCTACAG CACACCAGGA AGCAACAACC TCAACCACGG TGAAGCCGTC GCCGTCGGCA TGGTACTTGC CGCACGCTTG TCAAACACAT TAGGTCTGGC ACCCGCAGAA GACACCGAGA CACTGAAAAA CCTACTGGAT GCCTACGGCT TGCCCACTGT CCTGCCCTCA GGTCTAACAC CTGAAATGCT CCTGGAGCGT ATGCGCCTGG ACAAAAAAAA CATTGCCGGC CGCTTACGCT TGGTCCTATG GCGCGGTATT GGCCACGCCG AAGCCGTCCC CGACGTTGAT GAAGCAGCCG TGCGACAGAT CCTGGCCAAC TAA
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Protein sequence | MTTPTPLRSV TVNTPPPYTI AIGPGLLHDP PRLAATIRGR HALILSDSEV APRYAAQLHE TLLRARPDLH LNVFTLPAGE TSKSLENFGA AIAQLATLGA TRDACLFALG GGVIGDLAGF TAACWMRGID YVQVPTTLLA MVDSSVGGKT AVDIPQGKNM VGAFHPPRAV IADTDTLATL PLRELRAGLS EVIKYGAIRD PVFFHWLQTT REALLARDPA ALAQAIARSC EHKADIVGRD PLEKGERVLL NLGHTFGHAI ETTQGYSTPG SNNLNHGEAV AVGMVLAARL SNTLGLAPAE DTETLKNLLD AYGLPTVLPS GLTPEMLLER MRLDKKNIAG RLRLVLWRGI GHAEAVPDVD EAAVRQILAN
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