| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0554 |
|---|
| Symbol | |
|---|
| ID | 6204121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 660944 |
|---|
| End bp | 662065 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641702091 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_001829272 |
|---|
| Protein GI | 182681112 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.86018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC CTATTATCCG TTCTATCCCG TTGCATGTTG TCTCAAATGA TCATCCTTCA
TCTTCCCCAT TGCAGCCTGG AGTAAAGCAA TCGGGTGAAG ACAAGATTGG GCGTTCGCCT
GTGCAGTTTG CAGATGTTCC GGTGTTACGT AAGCCATCAT GGATTCGCGT TCGCATTCCA
TCCGGCAATG CGGTGCAAAG TCTCAAAGCC AAGCTACGTG AGAATCGTTT AGTCACGGTG
TGTGAGGAGG CTGCCTGCCC TAATATCCAT GAGTGTTTTA GCCATGGCAC AGCGACGTTC
ATGATTCTGG GTGAAGTGTG CACGCGTCGT TGTTCGTTTT GCGATGTGGC GCATGGCCGC
CCCAAACCGC CGGACCCGGA GGAACCAATC AGTTTGGCAC GCACCGTCGC TGAGATGGGT
TTGAAGTACG TGGTGGTGAC CAGTGTGGAT CGCGATGATT TGCGTGACGG TGGTGCCCAG
CATTTTGTTG ATTGCATTGC TGCGATCCGT CAGAGTGCAC CACAAACACG GATCGAGATT
CTGACCCCAG ATTTCCGAGG AAAGGGACGC ATGGATCGTG CATTGGACAT TTTGGCGGCA
TGTCCGCCGG ATGTATTCAA TCATAACGTT GAAACGGTGC CCGCTTTGTA TCCCAATGTG
CGACCCGGAG CGGATTATCA ATGGTCATTG ACGCTCTTAA AACGCTTTAA GGCACAGCAT
CCGCAGGTGC CTACGAAGTC CGGGATCATG CTCGGTTTAG GGGAGACTCT GGATCAGGTA
CAGGCGACGT TGCGTGACTT GCGTGCTCAT GACGTGGATA TGGTCACGGT TGGTCAGTAT
CTGCAGCCGA CGCCGCATCA TCACCCAGTG TTGCGGTATT GGACTCCGGA TGAGTACAAG
GCGTTGGAAG AGTACGGTAT GGCGTTGGGT TTCAGCCACG TTGCTTCAGG TCCGATGGTG
CGTTCTTCGT ATCACGCCGA CCATCAGGCG AAAGAGGCGG GCTTAGGCTT CAATGCCACC
GTTTCGCTGG GCTCTCCAGC GGTATCGTCG ACTGAACATC GGGAGCGCAA TACCATCGCA
TCAAAATCAG CCTCTAAGAC TGAATCGATC CATCATAGAT AG
|
|---|
| Protein sequence | MTQPIIRSIP LHVVSNDHPS SSPLQPGVKQ SGEDKIGRSP VQFADVPVLR KPSWIRVRIP
SGNAVQSLKA KLRENRLVTV CEEAACPNIH ECFSHGTATF MILGEVCTRR CSFCDVAHGR
PKPPDPEEPI SLARTVAEMG LKYVVVTSVD RDDLRDGGAQ HFVDCIAAIR QSAPQTRIEI
LTPDFRGKGR MDRALDILAA CPPDVFNHNV ETVPALYPNV RPGADYQWSL TLLKRFKAQH
PQVPTKSGIM LGLGETLDQV QATLRDLRAH DVDMVTVGQY LQPTPHHHPV LRYWTPDEYK
ALEEYGMALG FSHVASGPMV RSSYHADHQA KEAGLGFNAT VSLGSPAVSS TEHRERNTIA
SKSASKTESI HHR
|
|---|
| |