| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0552 |
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| Symbol | |
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| ID | 6201993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 654901 |
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| End bp | 657102 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641702089 |
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| Product | autotransporter beta-domain-containing protein |
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| Protein accession | YP_001829270 |
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| Protein GI | 182681110 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA AGAATCATAA AAAAACAACA TTAGCCACCC TCATCTCCGT ACTACTGATG
GGAAGCGCTG GTGCCACCTA TGCAAACTCG CCATCCATAT CGGAGAAACT AGATTTGGCG
ACACAGCATC TTGATGGTGC TGCATCCACT GGCGAAGCAA TTTCCTCCGA TGGGAAAACC
ATCGCAACAT CCATCAATAA TCGTACTCGT GCATTCCTGT TATCCGGTGA CAATTGGGCA
ACAAAAACCG AGCTTGGCTC ATTAAAAAGC GATAGTTCAG GTACTTCTAT TGTTAGAGCG
CTCTCTGCGG ATGGAAAAAT CGCTGCGGGA ATATCCTCAG TTGATTCCAG TTCTACTCAA
CTGCATGCAA CCATTTGGTC AGGCGACAAC TGGGCAACAA AAACGACTCT CGGAACGTTA
GCAACAAATA ACGGGGGTGA CTCTGTTGTT TACGCACTCT CCGCCGATGG GAAAGTCGCT
GCAGGACAAA CCGCAGCCTC GATAGGTACT CTTCATGCGG TTATCTGGTC GGGAGACAAT
TGGGCAACAA AAACGGATCT AGGAACAATA AGAAGCGATG GTACAGGTGA TTCTATGGTT
AAGGCGCTTT CCGCTGATGG GAAAATCGCC GTTGGCTCTG CTGCCTCTGA TATCAAAACC
CCTGTTAATG GGATGTACGC AGGAGGCGTC CTTACAGGGC CAAATAGTGT CCGCGCTATT
GCCTGGTCAG GCGACAATTG GGCAACAAAA ACTGACCTCG GCACGTTAAG AAGCGATAAC
CTAGGGGCCG CCGTTGCCAA TGCGATCTCC GCCGACGGGA AAGTGATCGG TGGGGCTTCT
CACCATTACG TCACCACTGA ATACTACCGC GCGAATGCTG ATCAGCTAGC AACCATCTGG
TCAGGTGGCA ACTGGGCAAC AAAAACGAAC TTAGGATCAC TCAGAAGCGA TAACTCAGGT
GCATCTTTGG TGGCAGCACT CTCTGCCGAT GGCAGCATCG CAGGTGGAGC CGCTCTAAAC
GACGCTAATG CCACGCGAGC CATCATCTGG TCAGGCAGCC ACTGGGCAAC AAAAACAGAT
TTAGGAACAC TCAAAAGCGA TAACTCTGGA AATTCCGAGG TGGTAGCACT CTCCCCTGAT
GGCAGCGTCG CCGTAGGAAC TGCTGCTACT GATTCAGGCA GCTCACATGC CACCGTCTGG
AAAATCACCT ATCCAACAGA ATCAACAAGT ACATCAGACA GTACCACTAA CACCCAAACA
CCTTCACAAC CTTCACAACC ATCCGTCGTC ACGGTCGATG CAGACAACAC GAAAAAAACT
TTATCGCAGT TGGGTGCAGA AACCTTCTCG GTGATGGACT TACAACGTCA AGGATTGACC
CGCCTGCAAC AACACTGTCA GATAGACGCG GCGGGGCAAT CCTGTTGGGG TATACAGACT
GCGATCAGCT CTATAGACGG CAACCGAGAT AAAGTCGCCG GTATCAGACT GGGTCATGGG
TTCACCGAAA CATTTTCTGC CGGCGTCTCC CTGGATCGCT CCCTGTCCCG CTCCCTGCCA
GATAGTTACC TGAAAAATAA TGGCAATCTG GGTGCAGGCC TGTATGCACA ATGGAATACC
GCTTTCAAAG GGAGCCAATG GTATGTGCGT CCGGCCGTGG CATTTAATCG CTACAACGTC
ACCGTGCAAC GTCCAGTCCT TGAAAATACA GAGGCGGGCA TCGGCACCAG TCGTATGAAG
GGCCGTGGCG CTTCGCTGGA AGCAGGACAA ACCTTTAAGT CCGATCATGG CGTTTTGTTA
GGCTGGCATC TAGGAGGACG TTACAACAAC GTTTCCCGTG CTGAATACAG CGAACAAAAT
GCTGCGTTCC CAACCACTTA CGGCAAGGCG AGCTTCAAAC GCACTTCTGC TTATCTTGGT
GCAGACGCAA CCATCCCATT AACCACGAAC CTAAAATGGA TGGCTGCTGT TGAAATAGAC
CGGGCACTGA AAAACCGTGA TGCCGTGTAC AGTGCACAAG CCGATTATAT TGGCAGCTTT
AACCATCGTG CCGGAATCAA AGGCACCATT GCGACACTAT CAAGCGGATT GCAATACACC
ATCAGTGAAA AAATATTGCT TGGATTAACG CTGGATGTGA ATCAAACCGC CTTTGGCGAT
ATCGCACGTG GCGGAACGTT CACTGTAGGC GGACATTTCT AA
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| Protein sequence | MERKNHKKTT LATLISVLLM GSAGATYANS PSISEKLDLA TQHLDGAAST GEAISSDGKT
IATSINNRTR AFLLSGDNWA TKTELGSLKS DSSGTSIVRA LSADGKIAAG ISSVDSSSTQ
LHATIWSGDN WATKTTLGTL ATNNGGDSVV YALSADGKVA AGQTAASIGT LHAVIWSGDN
WATKTDLGTI RSDGTGDSMV KALSADGKIA VGSAASDIKT PVNGMYAGGV LTGPNSVRAI
AWSGDNWATK TDLGTLRSDN LGAAVANAIS ADGKVIGGAS HHYVTTEYYR ANADQLATIW
SGGNWATKTN LGSLRSDNSG ASLVAALSAD GSIAGGAALN DANATRAIIW SGSHWATKTD
LGTLKSDNSG NSEVVALSPD GSVAVGTAAT DSGSSHATVW KITYPTESTS TSDSTTNTQT
PSQPSQPSVV TVDADNTKKT LSQLGAETFS VMDLQRQGLT RLQQHCQIDA AGQSCWGIQT
AISSIDGNRD KVAGIRLGHG FTETFSAGVS LDRSLSRSLP DSYLKNNGNL GAGLYAQWNT
AFKGSQWYVR PAVAFNRYNV TVQRPVLENT EAGIGTSRMK GRGASLEAGQ TFKSDHGVLL
GWHLGGRYNN VSRAEYSEQN AAFPTTYGKA SFKRTSAYLG ADATIPLTTN LKWMAAVEID
RALKNRDAVY SAQADYIGSF NHRAGIKGTI ATLSSGLQYT ISEKILLGLT LDVNQTAFGD
IARGGTFTVG GHF
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