Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0501 |
Symbol | |
ID | 6202899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 606264 |
End bp | 608765 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641702039 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001829222 |
Protein GI | 182681062 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCACC ACGCTCTGCC AATTGATGCG CTACTACCAG CTATAACAAC GAGCTTATCC AATCATCCAC GCCTGATTTT GGAAGCCCCA CCAGGGGCAG GCAAAACCAC CCAAGTACCG CTGGCCTTAC TTGATGCGCC GTGGCTGAAC GGACGCAGCA TCATCCTTTT GGAACCACGC CGGGTCGCCG CACGCAATGC GGCACTGTTC ATGGCCCGCC AATGCGGTGA AGAGGTCGGT GGGCTTGTCG GCTATCACAT CCGGTTTGAA AGTAAAGTCT CTGCACGCAC CCGCATTCAC GTCGTGACGG AAGGAATTCT GACCCGGATC ATCCAGGATG ACCCGCTGCT GGATGGGATC GGCGCGCTGC TGTTCGACGA ATTCCATGAG CGCCATTTGG CCAGCGACCT TGGCTTGGCG TTGGCACTGG ACGTGCAGAC ACAGCTACGT GAGGATCTAC GCATTGTCGT GATGTCAGCA ACCCTGCAAG GGCAACGCTT GGCGCAATTT CTCGATGCAC CACGTCTGAC CAGCGAAGGG CGTGCCTACC CCATTACGAT CACTCACTTT CCTGCGCGCC GTGATGAATC ACTTGAAACA CAGGCAAGCC GCGCCATTCA GCATGCTCTG GACACACACC AAGGTGACGT GCTGACCTTC CTCCCCGGCC AGCGAGAGAT CGCCAGGTTA CAAGCCATAC TGGAGAAAAC ACTCTCCCCA GAATTGCACG TGATGCCACT GCACGGTGAA CTACCGCTGC AAGAGCAAAC ACGTGTGCTG GAACCAGATC AACATGGCAG GCGACGCATC GTGCTAGCCA CTAATGTCGC TGAGTCCTCA ATCACCTTAC CGGGAATATC GGTGGTGATC GACAGCGGAT TAGCACGTGA ACCTGCCTAC GATCCGAATA CCGGCTTCAC ACGCCTGGAT GTGGTGAGCA TCACGCAAGC TTCGGCTGAC CAACGCGCTG GACGTGCAGG CCGCCTCGCC CCAGGCTGGG CCTATCGGCT GTGGCCGCAA TCACAACGAC TGGAAGCACA ACGCCGACCG GAAATAATCC AAACCGAATT ATCTGGTCTG GCCCTGGAAC TGACAGCTTG GGGCAGCAGC ACACTGCGCT TCATCGACCC CCCTCCCTCT GGCGCGTTGA GCGCTGCACG CGAATTACTA CAACGACTGG GTGCGATCAG TAACACCTCC ACCCTCACTC CCCTGGGTAA GCGCATGCTG GCACTGGGCA TTCATCCACG TCTGGCCGCC ATGTTGCTGG CCCCACACGA TCCGCAGGAA CAGGCGCTGG CCTGCGATTT GGCAGCATTA CTTGATGCGC GCGATCCACT GCGCGGCAGC GGCGACGCGC TGATTAGTCG CTGGCGTGCC TTAGCCGAAT TACGCAGCGG CTGTCTCCCT CACGACACCA AACGCAGCAC ACTAAAAGCC ATCGACGCCA CAACGCACCA ATGGCGAAGG CGCATCCGCT GTGACGCCAC ACCACCGGAT GCGATAGAAG CGCATACCCT CGGCAACCTA CTCACATATG CTTTCCCTGA ACGCATCGCC GCACGTCATT CCAGTGACCC ACTGTATTAC GTATTAGCGA ACGGCCGCCG TATGCGCCTG TTAGACAACA GTGCGCTGCA TGGCGAACCT TGGATCATCG CCAGCGAGTT ACATCACGGG ATCAAAGACA TCCAACTGCT CTGTGGTGCC CCTTTGGATG AGAGAAAGTT GCACGCTGAT TTCCCCGAAC GCTTCATCCA ACACGATGTC ATACGCTGGG AAACAGATAA ACGCGCCTTG GTGGCGCAGC GTGAATCCTG CTTCGACCGC ATCGTCCTCG ACGTACGCCC CGCCGGACGC ATTGATCCAG TACAGGCTGC AAACGTATTA ACCGGAGCCG TACGCACGCT CGGCCTGGAT ACCCTCTCGT GGACAGAACA CCTACGCCAG TGGCAGGCAC GCGCTGTAGC ACTGCGTCAC TGGATTCCGG AGCTTGAACT TCCAGACCTT TCCAATACAA CGTTACTAGC AACACTGGAC ACGTGGTTAA GACCAGCATT CGCAGGGAAA ACCAGACTGG ATGCACTGGA TGAAGCGGCA TTCGAGCAAG CAGTCAAATC GCTACTGTCG TGGACACAAC ACGCACTCAT CGACCGTCAT GTACCCGCCC ACATCATCGT ACCGTCTGGG ATGGGACGCC ACATTGACTA TGGATTAGCC GACGATGGCA CGCCGCAGCC GCCAGTGCTT TCTGTCAAAC TACAAGAATT ATTTGGTCTG CCCGATACCC CACGCATCGC AAAAAACCGT ATCCCTCTCA CTCTACACCT ACTCTCACCT GGCGGGCGCC CGCTGCAAGT GACTCAGGAT TTAAAGAGTT TCTGGACTAA CACGTATCCG GAAGTGAAGA AAGAAATGAA AGGACGCTAT CCGAAACACC CATGGCCCGA CGATCCATGG ACTGCAACCG CCACCCACCG CACGAAATCA CCTGGAAAGT AA
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Protein sequence | MNHHALPIDA LLPAITTSLS NHPRLILEAP PGAGKTTQVP LALLDAPWLN GRSIILLEPR RVAARNAALF MARQCGEEVG GLVGYHIRFE SKVSARTRIH VVTEGILTRI IQDDPLLDGI GALLFDEFHE RHLASDLGLA LALDVQTQLR EDLRIVVMSA TLQGQRLAQF LDAPRLTSEG RAYPITITHF PARRDESLET QASRAIQHAL DTHQGDVLTF LPGQREIARL QAILEKTLSP ELHVMPLHGE LPLQEQTRVL EPDQHGRRRI VLATNVAESS ITLPGISVVI DSGLAREPAY DPNTGFTRLD VVSITQASAD QRAGRAGRLA PGWAYRLWPQ SQRLEAQRRP EIIQTELSGL ALELTAWGSS TLRFIDPPPS GALSAARELL QRLGAISNTS TLTPLGKRML ALGIHPRLAA MLLAPHDPQE QALACDLAAL LDARDPLRGS GDALISRWRA LAELRSGCLP HDTKRSTLKA IDATTHQWRR RIRCDATPPD AIEAHTLGNL LTYAFPERIA ARHSSDPLYY VLANGRRMRL LDNSALHGEP WIIASELHHG IKDIQLLCGA PLDERKLHAD FPERFIQHDV IRWETDKRAL VAQRESCFDR IVLDVRPAGR IDPVQAANVL TGAVRTLGLD TLSWTEHLRQ WQARAVALRH WIPELELPDL SNTTLLATLD TWLRPAFAGK TRLDALDEAA FEQAVKSLLS WTQHALIDRH VPAHIIVPSG MGRHIDYGLA DDGTPQPPVL SVKLQELFGL PDTPRIAKNR IPLTLHLLSP GGRPLQVTQD LKSFWTNTYP EVKKEMKGRY PKHPWPDDPW TATATHRTKS PGK
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