Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0487 |
Symbol | |
ID | 6203948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 588917 |
End bp | 590746 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641702025 |
Product | GTP-binding protein TypA |
Protein accession | YP_001829208 |
Protein GI | 182681048 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATAG AAAATCTCCG TAATATCGCC ATCGTTGCTC ACGTTGACCA TGGTAAGACC ACTCTTGTTG ATCAGTTGCT TAAGCAATCT GGGACTTTCA GCGAACGTGC CCAGGTGGGT GAGCGCGTGA TGGACAGCAA TGACCAGGAA AAGGAACGCG GTATCACAAT TCTTGCTAAA AATACGGCAA TCAAATGGAA TGGTAACCGC ATCAACATTG TTGATACTCC TGGGCATGCT GATTTTGGAG GGGAGGTTGA ACGCGTATTG TCGATGGTTG ATTCAGTCCT ACTGTTGGTG GATGCAATGG ATGGGCCAAT GCCGCAGACG CGCTTCGTGA CTCAGAAGGC TTTTGCAATG GGGTTTAAGC CGATTGTGGT GGTCAACAAG ATTGATCGTC CTGGTGCTCG TCCGGATTGG GTTGTTGAGC AGGTTTGGGA CTTATTCGAC CGTCTCGGTG CTACACCGGA GCAGATGGAC TTTCCGATTG TCTATGCCTC GGCACTAAAT GGCTATGCCA GCTTGGAGTC AAGTGCGCGG GCGGGGGATA TGAATCCGCT GTACGAAGCG ATCATGCAGC ACGTTCAACC GCCGCAAGTT GACCTGCATG GCCCATTTCA GATGCGTATC AGTCAATTGG ACTACAACAG TTACGTTGGC CTCATTGGTA TTGGTCGGAT TCAACGTGGC AAGGTGTCTA CTAACATGCC GGTGACGGTC ATTGATCGCA TGGGTAATAA ACATAATGGT AAAGTTCTCC AGGTACTCGG TTTCCTTGGT CTGGAGCGTC ATGAGGTTGA GGAAGCCCAG GCAGGCGATA TCGTTGCTAT TTCAGGTATT GAGTCACTCA GTATTTCCGA TACCCTTACT GACCCAACGG CCCCAGATGC GCTGCCAGCA TTGAGCGTTG ATGAACCGAC AATCAGTATG ACCTTTCAAG TTAATAATTC GCCATTTGCT GGGCAGAAGG AATATTCGGG TGGGAAGTTC CTGACAAGCC GTCAGATCCG TGAGCGCTTG GCTCGCGAAA CTTTACATAA TGTTGCGTTG CGTGTTGAGG ATACCGAGGA TCCTGACAGA TTTAAGGTTT CCGGTCGAGG TGAGCTGCAC TTGTCTGTCT TGATTGAGAC TATGCGGCGT GAGGGCTATG AATTGGGTGT ATCGCGCCCG GAAGTCATCA TCAAGGAAAT CGATGGAATA CTCCAAGAGC CTTACGAGCA GTTAGTCGTG GACGTGGAGG AGGAGCATCA AGGTGGTGTG ATAGAGCGCT TGGGCACGCG TAAAGCTCAG TTGTCGAATA TGGAGTTGGA TGGTAAGGGG CGCGTACGTT TGGATTACAT TATCCCGGCG CGTGGTTTGA TTGGTTTCCA GACTGAGTTT AAAACCATCA CTTCTGGGAG CGGCCTTCTG TTCCACATCT TTGATCACTA CGGCCCGAAA GCTGATGGTC CGATTGCTAA GCGTATCAAC GGTGTCATGA TTTCTAATGG TCATGGCAAA GCACCTGGGT ACGCTTTGAT GGGTTTGCAA GAACGTGGGC GTTTGTTGAT TGATGCTGGT GAGGATATTT ACGAAGGCAT GTTAGTTGGC ATCCATTCCA AGGATAATGA CCTGACCGTC AATGCACTTC GCGAGAAGCA ATTGACAAAT ATTCGTGCTT CTGGGAAGGA CGACGCAATC TCATTGACCC CGCCCATTAA GATGTCCTTG GAGCAGGCGT TAGAGTTTAT CGAAGATGAC GAGTTGGTTG AGGTCACGCC GAAGGCAATC CGGTTACGGA AAAAATATCT TAGTGAAAAT GATCGCAAGC GTGCCAGTCG TACTGGCTGA
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Protein sequence | MSIENLRNIA IVAHVDHGKT TLVDQLLKQS GTFSERAQVG ERVMDSNDQE KERGITILAK NTAIKWNGNR INIVDTPGHA DFGGEVERVL SMVDSVLLLV DAMDGPMPQT RFVTQKAFAM GFKPIVVVNK IDRPGARPDW VVEQVWDLFD RLGATPEQMD FPIVYASALN GYASLESSAR AGDMNPLYEA IMQHVQPPQV DLHGPFQMRI SQLDYNSYVG LIGIGRIQRG KVSTNMPVTV IDRMGNKHNG KVLQVLGFLG LERHEVEEAQ AGDIVAISGI ESLSISDTLT DPTAPDALPA LSVDEPTISM TFQVNNSPFA GQKEYSGGKF LTSRQIRERL ARETLHNVAL RVEDTEDPDR FKVSGRGELH LSVLIETMRR EGYELGVSRP EVIIKEIDGI LQEPYEQLVV DVEEEHQGGV IERLGTRKAQ LSNMELDGKG RVRLDYIIPA RGLIGFQTEF KTITSGSGLL FHIFDHYGPK ADGPIAKRIN GVMISNGHGK APGYALMGLQ ERGRLLIDAG EDIYEGMLVG IHSKDNDLTV NALREKQLTN IRASGKDDAI SLTPPIKMSL EQALEFIEDD ELVEVTPKAI RLRKKYLSEN DRKRASRTG
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