Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0479 |
Symbol | |
ID | 6202201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 581267 |
End bp | 581944 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641702017 |
Product | HAD family hydrolase |
Protein accession | YP_001829200 |
Protein GI | 182681040 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGTG CTCCGTTGTC ATTCATGCCC GAGGCGGTGA TCTTCGACAT GGATGGTCTG ATGCTTGATA GCGAGCGCGT GAGCATCGAA TGTCGGTGTC GCGCTGCGTT TGATCTTGAG CACCAAATTG AGCCGGATTA CTGGTTGCAG ATGGTCGGGG TGAGCGATAT CGCTTGTCAC GTGCAGCTGA GCGCACGCAT TGGTGCTGTA TCAGCGACAG CGTTGTTGGC CCGCAGCGAT GCGTTATATG AGGCGGTGGT TATGAAGGGT GTGCCGCATC GGCCAGGAAT CGTTACGTTA CTGGAGTGGC TGTTCGCGCG TGGTATTCCG TGTGCGGTTG GTACGTCTAC GCGGCGTCCG TTGGCGCTGC GTAAATTGAA TACGGCAGGC TTGTTGTCGC GTTTCGATGT GGTGTGTACT GCGAGTGAAG TTGCGCAAGC TAAGCCAGCG CCAGATATTT ATTTATTGGC TGCGCACACG CTTGGTATCG TTCCGAGGCG CTGCTTGGTG GTGGAGGATT CACCGATTGG GGTACGTGCC GCATTGGCTG CAGGTATGAC GCCAATTCAG GTGCCGGATT TGCTGATGCC GGATGCTCAG GTAAGCGCGC TGGGGCACCG GATTGTGGCT TCATTGACAG AGGTGCAGAG CCTGTTGGAA GCGTGTTTTG ATGTCTGA
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Protein sequence | MVSAPLSFMP EAVIFDMDGL MLDSERVSIE CRCRAAFDLE HQIEPDYWLQ MVGVSDIACH VQLSARIGAV SATALLARSD ALYEAVVMKG VPHRPGIVTL LEWLFARGIP CAVGTSTRRP LALRKLNTAG LLSRFDVVCT ASEVAQAKPA PDIYLLAAHT LGIVPRRCLV VEDSPIGVRA ALAAGMTPIQ VPDLLMPDAQ VSALGHRIVA SLTEVQSLLE ACFDV
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