Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0348 |
Symbol | |
ID | 6202025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 444820 |
End bp | 446061 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701882 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001829070 |
Protein GI | 182680910 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATC CGCTTTCTGT TGCGATCGGT TTGCGTTATC TGCGTGCCAA GCGGCGCAAT GGTTTCATCT CGTTTATTTC AATGGCTTCC ATCCTGGGCA TTGCTCTGGG AGTGACTGTC TTGATTACTA CCTTGGCAGT GATGAGCGGC TTTCAGAAAG AGATTCGTGA CCGATTGTTG CAAATGTCTG CACACGCAAC GGTGAGTGCG CAGGGAGCAC CGATGCATGA TTGGCAGCAT GCAGTTGCGT TGGCGATGAC TGATCCCCGC GTCGCTGGTG CTGCGCCGTA CATCGAGAGT GAAGCGTTGC TCCAGGGGGA GCGTCATCAG CCTGCGATGA TGCGTGGCAT CGTGCCCAAC CAGGAAACTA AGGTTTCGGT GCTGGCGCAG AAATTGAAGG TTGGTTCAAT TGATAGTCTC AAGCCCGGTG AGTACAACAT CTTGCTTGGT AAGGAGTTAG CCTTGTGGTT AGGCGTTGAT GTCGGCGACA GCGTGATCGT GCTCCTCAGT CAAACTCAGA CCACTCCAGT GGGGACGATG CCACGGATGA AGCGCTTCAC CGTCAGTGGC TTGTTTGAAG TCGGCTACAA CGAAATCGAC CGTGGCTTAG CGGTGGTCAA TATGGAGGAT ATGCAGAAGA TCATGCGGAT GGACGGTGTG ACCGGCGTGC GTTTGAAATT GCACGATATG GATCATGCCT GGGACGTTGC GAGTGACTTG GCGGTCCGCC TGAATGGCCC CTATCTGGTG AGCGACTGGA CACGCGAAAA TGCCAATCTG TACAGTTCAT TGAAGATGGA AAAAACGGTG ATGGGCATTT TGCTCTCCCT GATCATCGCG ATGGGCGCCT TCAACTTGGT GTCCTCGCAG GTGATGTTGG TCACTGATAA GCAAGCCGAT ATCGCCATCT TGCGCACCTT GGGTTTGTCG CCAGCAGGGG TGATGCGAGT ATTTATGGTG CAGGGGTCGT TGATTGGCAT CATCGGTACC CTCTCTGGCG TGATCGGTGG TGTGGTGCTG ACTTGGAATC TGGAGCGAAT CCTGAAATTG ATTGAATCCA CGTTCAACAT TACCCTGCTT CCGGAGGATG TGTATTACAT CACTGGCCTG CCGACCGATA TGCAGTTCCC TGATGTGGTA GTGATTACTC TGATGGCGTT GGCAATGAGT TTCATTGCCA CCTTGTACCC GGCGTGGCGT GCCGCCAGGA TTCAGCCAGC AGAGGCGCTG CGTTATGAAT GA
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Protein sequence | MFNPLSVAIG LRYLRAKRRN GFISFISMAS ILGIALGVTV LITTLAVMSG FQKEIRDRLL QMSAHATVSA QGAPMHDWQH AVALAMTDPR VAGAAPYIES EALLQGERHQ PAMMRGIVPN QETKVSVLAQ KLKVGSIDSL KPGEYNILLG KELALWLGVD VGDSVIVLLS QTQTTPVGTM PRMKRFTVSG LFEVGYNEID RGLAVVNMED MQKIMRMDGV TGVRLKLHDM DHAWDVASDL AVRLNGPYLV SDWTRENANL YSSLKMEKTV MGILLSLIIA MGAFNLVSSQ VMLVTDKQAD IAILRTLGLS PAGVMRVFMV QGSLIGIIGT LSGVIGGVVL TWNLERILKL IESTFNITLL PEDVYYITGL PTDMQFPDVV VITLMALAMS FIATLYPAWR AARIQPAEAL RYE
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