Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0345 |
Symbol | sdhB |
ID | 6201971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 443237 |
End bp | 444022 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641701879 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001829067 |
Protein GI | 182680907 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGT TCACTCTCCC TAAGAATTCG AAGATCGGTA AGGGGACGCA TTTCCCCGCC AAAAGCGGTA CTAAAAATGC TCGCACCTTT AAGGTCTACC GTTGGAATCC GGATGATGAT GCCAATCCGC GTACCGATAC CTACGAAATT GATCTAGATA CATGCGGCCC GATGGTTTTG GATGCGTTGA TCAAGATTAA GAATGAGATC GACCCGACTC TGACGTTCCG TCGTTCTTGC CGCGAGGGTA TTTGTGGCTC ATGTGCGATG AACATTGATG GGACCAACAC GTTAGCTTGT ACCAAGGCGA TTAGTGCATG CACCATATCT GAGATCCCGA TCTATCCACT GCCTCACATG AACGTGATCA AGGATTTGAT CCCCGACTTG ACTCACTTTT ATGCGCAGTA CGCTTCTATT AAGCCCTGGA TACGTACTCA GACCCCGCCG CCGCCTGATC GTGAGCGATT GCAGTCTCCT GTGGACCGCA AGAAGCTTGA TGGTTTGTAT GAGTGCATTC TATGTGCCTG TTGCTCGACG AGTTGTCCGA GTTACTGGTG GAATGGTGAT CGCTATTTGG GTCCGGCGAT CTTGCTGCAG GCTTACCGCT GGATTATCGA TTCACGTGAT GAAGATACTG GCGCGCGCTT GGATGATCTC GAGGATCCAT TCAAGTTATA TCGTTGTCAT ACCATCATGA ATTGCACGCG AACCTGTCCG AAGGGATTGA ATCCCGCTCA GGCCATTGCC GAGATCAAAA AACTGATGAT GCTGCGTCGC GCCTGA
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Protein sequence | MAEFTLPKNS KIGKGTHFPA KSGTKNARTF KVYRWNPDDD ANPRTDTYEI DLDTCGPMVL DALIKIKNEI DPTLTFRRSC REGICGSCAM NIDGTNTLAC TKAISACTIS EIPIYPLPHM NVIKDLIPDL THFYAQYASI KPWIRTQTPP PPDRERLQSP VDRKKLDGLY ECILCACCST SCPSYWWNGD RYLGPAILLQ AYRWIIDSRD EDTGARLDDL EDPFKLYRCH TIMNCTRTCP KGLNPAQAIA EIKKLMMLRR A
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