Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0317 |
Symbol | rnhB |
ID | 6204146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 413252 |
End bp | 413956 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701848 |
Product | ribonuclease HII |
Protein accession | YP_001829039 |
Protein GI | 182680879 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCCA AGTTTGATAC ACAACATCTC CTCAATAGCA ACACGGCACT TGTCGCTGGC GTCGACGAAG CCGGACGTGG CCCCCTCGCC GGACCAGTCG TCGTTGCAGC AGTCGTATTC GATCCCTCAC AACCACACAT CAACGGCCTT AACGATTCCA AACAATTGTC CCCTGCCTGC CGTGAACGTC TCTACGCTCA CATCGTTGAG CGCGCCTTGG CCTATAAAGT AGTCATGATC GACAGCACAC AGATCGATAC ACTGAATATT TACCAAGCCA CCATGCTCGG TATGCGCTTA GCGGTAGAAG GCGTCGCTCA CGTTGCGAAA TCCGCGAGAA TTGATGGCAA CCGTCTCCCT AAAAACCTCC CCTGCCCGGC TGAAGCTCTA GTCGGCGGTG ACGCACGTGA TCCCACAATC ATGGCCGCTT CCATACTGGC CAAAGTCACC CGCGATCGCC ATATGGTTGA ACTGCATCTG CAATATCCAC ATTACGGCTT CGACAAACAC AAAGGGTACG GAACACCGGC ACACCTGGCC GCTTTAGCAG AGCATGGCCC ATGTCTAGAG CACCGCCAAA GCTTCGCTCC TGTGCGCAGA ATGCTGACCC CTAAAGCCAT CCATGCAAGA CAATCAGCAC ATCAACACAA TGAGAACTCA CCTACTAAAG CAGCCTTTAA CATGCTCATA GAACGCGATG ATTGA
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Protein sequence | MVSKFDTQHL LNSNTALVAG VDEAGRGPLA GPVVVAAVVF DPSQPHINGL NDSKQLSPAC RERLYAHIVE RALAYKVVMI DSTQIDTLNI YQATMLGMRL AVEGVAHVAK SARIDGNRLP KNLPCPAEAL VGGDARDPTI MAASILAKVT RDRHMVELHL QYPHYGFDKH KGYGTPAHLA ALAEHGPCLE HRQSFAPVRR MLTPKAIHAR QSAHQHNENS PTKAAFNMLI ERDD
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