Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0306 |
Symbol | |
ID | 6204122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 390584 |
End bp | 391435 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641701838 |
Product | palmitoyl-CoA hydrolase |
Protein accession | YP_001829029 |
Protein GI | 182680869 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000146303 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCGC TGGAAAGGCT TGAAGATAAT CTGTTCCGTG GTCAAAACCG TGACATTGGA ACGAAATATG TGTTTGGTGG GCAAATACTT GCCCAAGCCC TGGCCGCAGC GCAAAACACC ATTGAAAACA GCCGCATTGC GCACTCCCTA CATGCCTACT TTCTACGCAC TGGCAACATC CAACAACCGA TTATCTATAA CGTAGAACGC ACTCGGGACG GCAAAAGCTT CTCATTACGC CGCGTCACCG CAATCCAGCA CGGTCAAGTA ATCTTTTTCT GCACGGCATC ATTCCAGGAA CGCGAAGACG GCGCTGAACA CCAAACCAAC ATGCCTGCAG TCCCTCCCCC TGAAGACATC GCACCAACCC CACCGCTGCC TCCGGAAACA CTAGCCAGAA TGCCACCCCA AATGCAAACC TGGCTCAACC TGAGCGGACA ATTTGAATTT CGCCGCGTGC CGCCCAACAA CACACTGGAT TTGCAGAAAC ATTCAGCATT CCAACACTTG TGGCTACGCA TGAACGCCCC ACTTGGTGAC CGCATTGAAT TGCATCAGAT ATTGCTAACC TACGCATCCG ACTTCCAACT CCTCGAAACA GCCACCTCAC GACATGGAAT CAACTACCAC ACACCACAAG TACAGATGGC CTCACTGGAC CATGCACTGT GGTTCCACCG CCCATTCCGC ATTGATGACT GGTTGTTATA TACGCTTGAA AGCCCCACCG CACAGGGCGC CCGCGGATTG GCCCGCGGAC AATTTTTCAC CCGCAATGGC GTATTGATCG CCAACACCGC CCAGGAAGGA CTCATGCGCA TGACCAACCA TACAACGCCC TCCAAGGATT AA
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Protein sequence | MLSLERLEDN LFRGQNRDIG TKYVFGGQIL AQALAAAQNT IENSRIAHSL HAYFLRTGNI QQPIIYNVER TRDGKSFSLR RVTAIQHGQV IFFCTASFQE REDGAEHQTN MPAVPPPEDI APTPPLPPET LARMPPQMQT WLNLSGQFEF RRVPPNNTLD LQKHSAFQHL WLRMNAPLGD RIELHQILLT YASDFQLLET ATSRHGINYH TPQVQMASLD HALWFHRPFR IDDWLLYTLE SPTAQGARGL ARGQFFTRNG VLIANTAQEG LMRMTNHTTP SKD
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