Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0299 |
Symbol | |
ID | 6204081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 380801 |
End bp | 385624 |
Gene Length | 4824 bp |
Protein Length | 1607 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641701831 |
Product | hemolysin-type calcium binding domain-containing protein |
Protein accession | YP_001829022 |
Protein GI | 182680862 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTGA CTGCAGAACA AGCTAACGCA TTACTGGGCA GCATCACCAC CAGGGAGCAG TTGCGCGATT TAATTAATCA ACTTGATATT CATAGCAGCG GCAGTATCAC GGTTTTATAT AGCGGTTATA CGGCCAATGG ACTCGATAAC TCTCAGATTA TTCAGGGGAT GCTGCATAAT GGCGACGATA TTCGGGTGAT TGATACCACT GAGGCCGCCA GGTTTCTGAA TGTCGATCCG ACTACTCCTA ATTGGAATAA ACCACTTTAT CAAAAACTAG AACAAATTAT CGGCGGTAAA CCTGATAAGT GGGGTACCCC CGCCAACCAA TTCCTGTTTG GCGAAAAAGC CGCCGATGGC ACACGTCTTC CGAATGGGGC TTGGGACACG ATCTCCGCCC GCTTTGTGAA TGAGACGGTG GGTGAGGTGC GCACCCTGAC CGGCGGTGCC TCGGTGAATG GGGTGTTTAA TCAAACCGAA CTGCCGCGCC TGCTGAACAA CCCCAATATC ACCTCGGTGG ATGGGTTGCC TATCGCTGAT TTGCGGCGCT TGGGGGCGGT GGGGTCCTTC CAGGCGATTT CAGCACAATC AGAGCATCTC TCTGGCTACT TAAAGCTGGC CATCAATGCG GATGGCTCCA TCATGAAATT ATCCGGTGGT ATCCCCAGCG TGGACAGCCA GCAGTACTTT GCGCTGACCG GTTTGGAAGG CAAGCCGCCG CTTGGGGATG CGGGACGTTA TGACAACCTC GCCCGATACA TCCCCGCGCG CTTGGACACT CACCTGGAGG GCGCACGTCT GGTGCAGGAC ATCAAAGACG GGTATCAGCG TACCACGCAG TTGTTGGGGC CGGAGTCTGC TGCGGCACGT GCTGATGCGT TGCGGGTGCT GGGCAAACTC GGTGTGGCTG CCGATCTGCT GTCGCTGGCG GTGATGGCGC ACGATGCCAA TGCGGCGTAC GCCAGTGGCA ATATCGAGGG CAGCCGGCAG ATTGTCCAGG ATTGGACCAG TCAGTATCTG GGTGGCTTGA TGGGTGGTTT GGCGGAGGCC AAAGCGGTTG GGCTGCTGTT GACTCCGGTA TATCTGGATG GCCCGATTGG GGCGGCTGTT GCTTCGGTGT TGACGGTGGC GGCCGGTGTG GAAGGCACGT TCTTAGGCAG TCATTACATT GGCGCTTTTC TGGATAAGGT GTTTGACCAG TTGCACCACA TCGGGGAGTT GTCAGGGGCG AGGTTGTATG ACTGGGTCAC TCAGATAGGC GATCTATTCA GACGCCTGAA TCAGACATTG CACACAGACA ACGCCTCCCT GCTAGATCTG CTGCATGACC TGTTTCGTCA TAGCCGTGAT GTACGCGACC CGCTGGTGCT GGACCTGGAC GGCGACGGCA TCACCCACGC CAGCGGCTGG GTGAAGTCCG ATGACGGCTT GCTGGTCCTG GACCGCAACG GCAACGGGCG TATTGATAAC GGCAGCGAAC TGTTCGGCGC CGATACCGTG CTCAGCAACG GTCACACCGC CGCCTCTGGC TTTGACGCCC TGCGTGATTT AGATAGCAAC GGTGATGGCC TCTTCAGTGC TGCCGACGCC CGCTTTACGG ACGTGCGCGT CTGGCGCGAT CTCAACCAAG ATGGCCAGTC CCAGGCCAAC GAACTGTTCA CCCTCTCCAC CCTGGGCATT GCCTCCATCA CCCTCACGCC TACGGACACC CAACGCGTGA ACCTGGGCAA CGGTAACGTG ATGGATGCCC GCGGCAGCTA CACCCGTACC GATGGCCGCA GCGGCACCGT TGGCAATCTG CAATTAGGTG TGGACCAGTT CTACCGCGAT TACCGCGGCG CCCACGACAA GGTGACCATC AATGACGCGG CCCGCGCCTT GCCAGCCATC AGCGGCAGCG GCGCAGTGCG CGATCTGCAA GAAGCCGCCA GCCTCTCACC TGCCTTATTG GTGGCGGTGC AGGCGCTGCT CTCTGGCACC ACCCAGGGCA CACTGCGTGC GGCGCTGGAT CAGGTGATCG CCCTGTGGGC CAGCACCTCA ACCATGCTGA GCACTGAGGA ACGCCTGAAA GCCTCCGCAG ATGTGGAGCG CACGGTGTAT TACCAGGGGT TCGTCCCTCC TGAGGTGACC GCCCAGGGGA AGGAGGCCGT TCTGGCCTTC CAACAGCAGC AGCGTACCCG GCTTGGGCCG ATGATCGGCA TTTTGGAAAA GTTCAACGGC TCTAGACTGA TTAGCGATCA AAACGACCAC ATACTGGGAG CACCGATCCT CAGCTGGAAC CGCGTTGTCC ATCCGGATGG ACACAAAGAA GATGTCATCA CCATCACGCT CATCCCTGAG CAACTCTACT CTGGGTTCGA TCCCCTTACG GATGCCTACG CCAAGCTCAA AGAATCCATC TATATCCGCC TGGTGCTGGA GCCACGGCTC AATGATTACC TGTCCGGACT CACCCTGACG TACAACAACG GCGTGATGGG ATGGGATGCC TCCGGCCTGG AGGCCAAGTT AGATCAGACC TGGCAGCACA ACAAAGCTCA GGCGCTACAA GATGTGATGG ACTTACAGCG CTACGGCCGT GACGCCCTGG CCCCCAGCGG TTGGAATCCC CTGGATGCCT TATGCCAGAT GGTCTATCGG ACTGCGGCAA CGCCCGATGG AAGGCAGGCG CTGGCCGATG CGGGCATTCC CCTGATTGCC GGAAATGCCG AGGGCAGTGC CGCCATGGAT CTGCTGTTTG GCGATGCGGG CGCCAATCTC CTGCGGGGCG GTGGCGGTGA TGATGTGCTC TCCGGTGGTG ATGGTGATGA CGTGCTGGAT GGTGGCGAAG GCAGCAATCG CCTGGAGGGC GGCGCCGGTC ACGATGTACT GAACGTGGCG AATGGCTGGA ATAACGTGCT GAACGGCGGC AGCGGCGATG ACCTGTTGTA TGGCAGTTTC TTTGCAGACA CATATCTGTT CAACAAAGGA GACGGCCACG ACACGCTCAT TGAGCAAGGC GGTGCTGACA AACTCGTCTT TGGTGTGGGC ATTGTTGCTA ACCAGGTGCG GCTGCTGCGC GAAGGGCAAG ATGTGGTGTT GGATTTGGGC AACGGTCAGG ACAGTATCCG TTTGAAGGAC TGGTTGACTT TCTATGGCGC CCGCAACCAT AGCGCCGATA TTGAGCAGAT CGTCTTTGCC GACGGCACGG TATGGACTGG GGAGACCTTG AGCACGCTGG GCCTCACCAC GCTGGGCACC TCGGGCAATG ACATCCTCAA TGGCTGGCAA GGCAATGATC TGCTGCTGGG CGGGGATGGC GATGACGTGC TAGACGGGGG CGAAGGCAGC AACCGTCTGG AGGGCGGCGC CGGTCACGAT GTACTGAACG TGGCGAATGG CTGGAATAAC GTGCTGAACG GCGGCAGCGG CGATGACCTG TTGTATGGCA GTTTCTTTGC AGACACCTAT CTGTTCAACA AAGGAGACGG CCGCGACACG CTCATTGAGC AAGGCGGTGC TGACAAGCTC GTCTTTGGTG CGGGGATTAT TGCTAGCCAG GTGCGGCTGC TGCACGAAGG GCAAGATGTG GTGTTGGACC TGGGCAACGG CCACGACAGT ATCCGCATGA AGGATTGGCT GACCTCTGAT GGCGAATACA ATCGCACCGG CAACATTGAA GAAATCCTTT TTGCTGACGG CACGAGGTGG ACAGGGGATA CGTTGGGTTG GAGGGAGATG ACGACGTTCG GTACTTCTGG TAATGACACT CTGCAGGGCT GGGGAAGCTC GGATATTCTG CTAGGTGGCA ATGGGGATGA TGTGCTGTCC GGGGATTATG GAGACGACAC GCTTTATGGA GAAGCAGGAG ACGATCTGCT GTTAGGTGAT AATGGAAACG ACGTGCTGGA CGGTGGGGAA GGCCACAACC GCCTGGAGGG CGGCGCCGGG AAGGATGTGC TGAAGGTGTC TACGGATGGC TCCTCGGACA ACGTATTCAG CGGGGGTACC GGTGATGACA TGTTGTACGG GAGTGTGCAT TCGGATACGT ATCTGTTCAA CCGGGGAGAT GGTCGCGACA CCATTGTGGA ACAGGGTGGT TTCGACAAGA TCGTGTTTGG TGAGGAGATT GCCGTCAGTG ATATACACGT GCTGCGTGAA GGTCAGGATG TTGTGCTGGA TCTGTATAAC GGATACGACA GCATCCGTTT AAAGGATTGG TTGACGTCCG ATGGTACCCG CAACAGTAAC GCCGACATTG AACAGATCGT GTTTGCCGAT GGCACGGTAT GGAGCGGAGA GACATTGAGC AGCATAGGTC TGAAGACGCT AGGAAGCGCA GACAATGACA CGCTGAACGG CTGGAACGGC CGGAACATCC TGGTTGGAGA GGATGGCGAT GACGTGTTGA AGGTATCTAT GTTTGACTCT TCGGATAACG TATTGGTCGG CTGCAGGGGC AACGATATGC TCTACGGCAG CAGCAATTCA GACACCTACT TTTTCGATCA GGGAGACGGT CACGACACCA TCATTGAGCA AGGCGGTGCT GACACGCTCG AGTTTGGTGA GGGGTTGCAT CGGGAGGAGG CGTGTTTTAC GCGCTCAGGT GATGATCTGT CTATCCTGTT CAATGGCAGT GAGGATCAGG TGACTGTGGC GGGTTGGTTC AGTGAGGCGG CGCATCAGGT GGAATCGTTG GTGTTCCAGG ATGGGACGGT GCTGTCCGGT GAGGTGGAGC GTTTGATTGA GGCGATGGCG CTGTCCCCTA CGGTGACGAC GATGCAAGCC AGTGTGCGTG ATATCAAGGA GTCGCCCAGG TTGGTCGCCA GTTCGATTGT GTGA
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Protein sequence | MSLTAEQANA LLGSITTREQ LRDLINQLDI HSSGSITVLY SGYTANGLDN SQIIQGMLHN GDDIRVIDTT EAARFLNVDP TTPNWNKPLY QKLEQIIGGK PDKWGTPANQ FLFGEKAADG TRLPNGAWDT ISARFVNETV GEVRTLTGGA SVNGVFNQTE LPRLLNNPNI TSVDGLPIAD LRRLGAVGSF QAISAQSEHL SGYLKLAINA DGSIMKLSGG IPSVDSQQYF ALTGLEGKPP LGDAGRYDNL ARYIPARLDT HLEGARLVQD IKDGYQRTTQ LLGPESAAAR ADALRVLGKL GVAADLLSLA VMAHDANAAY ASGNIEGSRQ IVQDWTSQYL GGLMGGLAEA KAVGLLLTPV YLDGPIGAAV ASVLTVAAGV EGTFLGSHYI GAFLDKVFDQ LHHIGELSGA RLYDWVTQIG DLFRRLNQTL HTDNASLLDL LHDLFRHSRD VRDPLVLDLD GDGITHASGW VKSDDGLLVL DRNGNGRIDN GSELFGADTV LSNGHTAASG FDALRDLDSN GDGLFSAADA RFTDVRVWRD LNQDGQSQAN ELFTLSTLGI ASITLTPTDT QRVNLGNGNV MDARGSYTRT DGRSGTVGNL QLGVDQFYRD YRGAHDKVTI NDAARALPAI SGSGAVRDLQ EAASLSPALL VAVQALLSGT TQGTLRAALD QVIALWASTS TMLSTEERLK ASADVERTVY YQGFVPPEVT AQGKEAVLAF QQQQRTRLGP MIGILEKFNG SRLISDQNDH ILGAPILSWN RVVHPDGHKE DVITITLIPE QLYSGFDPLT DAYAKLKESI YIRLVLEPRL NDYLSGLTLT YNNGVMGWDA SGLEAKLDQT WQHNKAQALQ DVMDLQRYGR DALAPSGWNP LDALCQMVYR TAATPDGRQA LADAGIPLIA GNAEGSAAMD LLFGDAGANL LRGGGGDDVL SGGDGDDVLD GGEGSNRLEG GAGHDVLNVA NGWNNVLNGG SGDDLLYGSF FADTYLFNKG DGHDTLIEQG GADKLVFGVG IVANQVRLLR EGQDVVLDLG NGQDSIRLKD WLTFYGARNH SADIEQIVFA DGTVWTGETL STLGLTTLGT SGNDILNGWQ GNDLLLGGDG DDVLDGGEGS NRLEGGAGHD VLNVANGWNN VLNGGSGDDL LYGSFFADTY LFNKGDGRDT LIEQGGADKL VFGAGIIASQ VRLLHEGQDV VLDLGNGHDS IRMKDWLTSD GEYNRTGNIE EILFADGTRW TGDTLGWREM TTFGTSGNDT LQGWGSSDIL LGGNGDDVLS GDYGDDTLYG EAGDDLLLGD NGNDVLDGGE GHNRLEGGAG KDVLKVSTDG SSDNVFSGGT GDDMLYGSVH SDTYLFNRGD GRDTIVEQGG FDKIVFGEEI AVSDIHVLRE GQDVVLDLYN GYDSIRLKDW LTSDGTRNSN ADIEQIVFAD GTVWSGETLS SIGLKTLGSA DNDTLNGWNG RNILVGEDGD DVLKVSMFDS SDNVLVGCRG NDMLYGSSNS DTYFFDQGDG HDTIIEQGGA DTLEFGEGLH REEACFTRSG DDLSILFNGS EDQVTVAGWF SEAAHQVESL VFQDGTVLSG EVERLIEAMA LSPTVTTMQA SVRDIKESPR LVASSIV
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