| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0259 |
|---|
| Symbol | |
|---|
| ID | 6203570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 338829 |
|---|
| End bp | 339869 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641701793 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001828984 |
|---|
| Protein GI | 182680824 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTG TTGCCGTTTT GCTGCTGTTA TTGACCTGCC ATTTTATGGT GTGGGCACAT
CCTGGTGAGA TACGGCATTT TTCAACCAAA GGCCCGGTGA CCGCACAACT GCGCATTCAA
GGGGCTAACG ATGTGGAGAG GTTTGCCGTG GTCATTGCTG ATTATCAGCG CCTGCATCCT
GGAAGCGAAG TGATCTATGA GGAGCAGATT GCATCGCAGA TCTATCACCG TTATCTGCAT
CCGGCATCAA GTCAGCCACC ACCGGATCTG TTGATCAGCG CGAGTATGGA TTTACAGATC
AAGCTGGCAA ATGACGGCCA CGCATTGGCC TATCGTTCGT CGCGAACCAG GGCACTGCCG
ACCTGGGCGC AGTGGCGTTA TGAGGTGTTC GGGATCGGTT ATGAACCAGC GGTCATCGTC
TACAACACCC GGCGGCTGCC GTCGCCGCAG GTGCCACGCA CCCGCCACCA ATTGCTTGCG
TTGCTGCGCG CCCCTGAGGC GCCATTGCGT GGTCAGATTG GAACCTATGA TGTGGAGCGC
AGTGCGGTGG GTTATCTATT GAGCACTCAG GATGCGCAGC TCGGCAGCAT TGCTGGCGCG
TTGTGGGAGG CGATGGGGGA GGAACGAGTG CAGTTGGAAG CAGGGACAGG GGCGTTGTTG
GAGCGTGTCG CCAGCGGCGA ATTGCTATTG GCCTATAACG TCCTTGGTTC GTATGCGCAG
GCGCGCGTGG ATGCTGGTGT GCCTCTTGGT ATCGTGCAGC CTGAGGATTA CACCCTGCTG
GCATTGCGTA CCGCTGTGAT CCCGCGTGGT GGCGTGCATG TGTCTGAGGC GCAGCGTTTC
CTTGATTATT TGTTGTCAGA GCGCGGCCAA CGGGTCCTGT CGCATGAAGT ACGGCTGATG
CCGGTGTTAC CGGGGAGTGA TCGTATTGTG TCCATGTTCC GTCCCATTGC ACTTGGACCA
GGGCTGCTGG TGTATCTGGA TACGTTGAAG CGTCGTCAAT TTTTGTATAC GTGGCGCAGT
AGCATGTTGC CGCCCCGTTG A
|
|---|
| Protein sequence | MIRVAVLLLL LTCHFMVWAH PGEIRHFSTK GPVTAQLRIQ GANDVERFAV VIADYQRLHP
GSEVIYEEQI ASQIYHRYLH PASSQPPPDL LISASMDLQI KLANDGHALA YRSSRTRALP
TWAQWRYEVF GIGYEPAVIV YNTRRLPSPQ VPRTRHQLLA LLRAPEAPLR GQIGTYDVER
SAVGYLLSTQ DAQLGSIAGA LWEAMGEERV QLEAGTGALL ERVASGELLL AYNVLGSYAQ
ARVDAGVPLG IVQPEDYTLL ALRTAVIPRG GVHVSEAQRF LDYLLSERGQ RVLSHEVRLM
PVLPGSDRIV SMFRPIALGP GLLVYLDTLK RRQFLYTWRS SMLPPR
|
|---|
| |