Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0191 |
Symbol | |
ID | 6202176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 261227 |
End bp | 263056 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641701729 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001828922 |
Protein GI | 182680762 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAATC CATCTTCTAC ACCGCTGCTG TTTGCAGATC TCGGCCTCTC CGATGCTGTG ATGCAAGCCG TCACAAAAAT CGGCTACGAA ACTCCGTCGC CCATCCAGGC GGCGACCATC CCAGCCTTGC TTGCTGGGCG CGATGTGCTG GGCCAAGCCC AGACCGGCAC TGGGAAGACT GCCGCATTCG CGCTACCGTT GCTCACACGC ACCGTTCTGA ACCAGGTCAA GCCGCAAGTG CTCGTACTGG CACCCACCCG CGAACTGGCT ATCCAAGTTG CCGAAGCATT CCAGCGCTAT GCTGCCTCGA TCTCTGGCTT CCGTGTCCTA CCCGTGTACG GCGGCCAATC CTATGGCCAA CAACTGGCCG CACTGAAACG CGGTGTCCAT GTGATCGTCG GTACCCCGGG CCGGGTGATT GATCACCTAG AGCGCGGCAC CCTGGATCTA TCGGAATTAA AAACGCTGGT CCTCGACGAA GCCGACGAAA TGCTGCGTAT GGGTTTCATT GAGGACGTTG AAGAAGTCCT ACGGAAGTTG CCCGCTTCAC GCCAGGTCGC TCTGTTCTCG GCAACCATGC CACCACAGAT CCGCCGTATC GCACAAACCT ATCTACAAGA TCCGATTGAA GTCACCATCG CCACCAAAAC CACGACCGCA GCCAACATCC GCCAACGTTA CTGGTGGGTC AGCGGCCTCC ACAAGCTAGA TGCACTCACA CGCATTCTTG AGGTGGAAAC CTTCGACGCA ATGATTATCT TCGTGCGCAC CAAAGCTGCC ACCGAAGAAT TGGCCGAGAA ATTGCAGGCA CGTGGCCTGA CCGCCGCAGC GATCAATGGC GATATGCAAC AAGCGCAACG CGAACGCACC ATTCACCAAC TCAAAGATGG CAAGCTGGAT ATCCTCGTTG CCACCGACGT CGCCGCACGT GGTTTGGACG TAGAACGTAT CAGCCACGTG CTGAACTACG ACATCCCTTA CGACGTTGAG AGCTACGTCC ACCGTATCGG ACGCACTGGG CGTGCCGGTC GCAGCGGCGA AGCAATCCTC TTTGTGACTC CGCGCGAAAA AGGCATGCTG CGCCAGATTG AACGTGCCAC TCACCAACCG ATCGAAGCCA TGCAACTGCC CAGTGTGGAT GCAGTCAACG ACACGCGCGT GACCAAATTT TTCGGACGCA TCAGCAATGC TCTGGTGGTC GGCGCTGAAA TCGACTTCTA CCGCAAACTG CTACAACGTT TCGAGAGCGA GCACAATGTC CCTGCCATTG AGATCGCTGC TGCCCTGGCA CGACTCCTTC AGGGGGATAG CCCCTTCCTG CTGAGTGTCC CGACGCGCCC CCAACGCGAG CGCAGCGAGC TGGCATCCGA GCATCATGTC AAACGCCCCT CATCCTTCAA GCAGACAGAG CGTCCAAACA ACACTGAACA CCCCAAGCGC CCCCAACGGA ACGCACCTGC CCGCAATGTC CCAGAGTTCG GTATGGAGTC TTACCGCATC GAAGTCGGCC GCATGCACGG TGTGAAGCCA GCCAATATCG TCGGCGCTAT CGCCAACGAA GCTGGATTAG AGAGCCGCTA CATTGGCCGG ATTGACATCC GTGACGATCA CTCGGTTCTG GATCTCCCCG CAGAAATGCC ACACGAGATC CTGCAACACC TAAAAAAGGT CTGGGTATCA GGACAGCAAC TACAAATGCG TCGGATCGAC ACAACCGAAA CAACCGCACC TGCACGGGAA TTTAAGTCAA AACCGGGTGG CGCTGGCAAA TTCCCGCCGA AACCGCATCA CAACAAATCA ACCAAACCAA AACCACCATA CAGCGGTTGA
|
Protein sequence | MSNPSSTPLL FADLGLSDAV MQAVTKIGYE TPSPIQAATI PALLAGRDVL GQAQTGTGKT AAFALPLLTR TVLNQVKPQV LVLAPTRELA IQVAEAFQRY AASISGFRVL PVYGGQSYGQ QLAALKRGVH VIVGTPGRVI DHLERGTLDL SELKTLVLDE ADEMLRMGFI EDVEEVLRKL PASRQVALFS ATMPPQIRRI AQTYLQDPIE VTIATKTTTA ANIRQRYWWV SGLHKLDALT RILEVETFDA MIIFVRTKAA TEELAEKLQA RGLTAAAING DMQQAQRERT IHQLKDGKLD ILVATDVAAR GLDVERISHV LNYDIPYDVE SYVHRIGRTG RAGRSGEAIL FVTPREKGML RQIERATHQP IEAMQLPSVD AVNDTRVTKF FGRISNALVV GAEIDFYRKL LQRFESEHNV PAIEIAAALA RLLQGDSPFL LSVPTRPQRE RSELASEHHV KRPSSFKQTE RPNNTEHPKR PQRNAPARNV PEFGMESYRI EVGRMHGVKP ANIVGAIANE AGLESRYIGR IDIRDDHSVL DLPAEMPHEI LQHLKKVWVS GQQLQMRRID TTETTAPARE FKSKPGGAGK FPPKPHHNKS TKPKPPYSG
|
| |