Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0170 |
Symbol | secF |
ID | 6203256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 233557 |
End bp | 234522 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641701706 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001828901 |
Protein GI | 182680741 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT TCCCGCTGCA TCTCATTCCG AACGACACCA AGATCGACTT CATGCGCTGG CGTAAACCGA CGTTGAGTTT GATGTCGATA CTTTTTGCAA TATCAGTCTT GGTTGTCGTT TTTAAGGGAT TTAACTATGC GCTGGAATTT ACCGGCGGCA CGCTAGTGCG TACTCAGTTC GCCAAGCCTG TGGATGCCGA TCAGGTGCGT CAGCGGCTGG AGGTTGGTGG TTTAGGGAAT GCACAGGTAC AGAGCGTCGG GGGTGGCAAC GAGTTGCTGA TCCGTTTGCA GCCGTATGGC GAGCATAATA ACGATGATGT GGCCAAAAAC GCTGCCGAAG CTGTGCGCAA AGTGATTACG TTGCCGGATA ATCCGGCAAC TGTACAGCCT GGGGAATTCG TTGGTCCACA GGTGGGAAAA GATCTCGCGA TGAATGGTGT ATACGCAACG ATCTTTATGC TGTTGGGTTT TTTGATTTAT ATCGGGTTTC GGTTTGAGTG GAAGTTTGCG GTTGCAGCCA GTCTAACGGC GTTCTTCGAT CTGATTTTGA CGATCGCTTA TATGTCGCTG CTTGGTCGGG AGTTCGACTT GACTGTTCTG GCTGGCTTGT TGTCTGTGAT GGGTTTTGCG ATCAATGACA TCATTGTGGT GTTTGACCGT GTGCGTGAGA ACTTCCGTAG CCTGCGTGTG GAGCCGTTAG AGGTGTTGAA TCGTTCGATC AATCAGACGC TATCTCGTAC GGTGATTACG GCGGTCATGT TCTTTCTGTC GGCGTTTGCG TTGTACTTGT ACGGCGGCCG CTCAATGGAG GGGTTGGCTG AAACCCATAT GGCTGGTGCG GTGATTGTGG TGGTGTCTTC AGTGGTTATG GCGGTGCCAT TGTTAACCAT TGGCCCTTTA AAGGTCAGTA AGCAAGATTT GCTGCCGAAG GCGAAAGACC TGGAGTCATT GGAGCGCCGT CCTTAA
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Protein sequence | MKLFPLHLIP NDTKIDFMRW RKPTLSLMSI LFAISVLVVV FKGFNYALEF TGGTLVRTQF AKPVDADQVR QRLEVGGLGN AQVQSVGGGN ELLIRLQPYG EHNNDDVAKN AAEAVRKVIT LPDNPATVQP GEFVGPQVGK DLAMNGVYAT IFMLLGFLIY IGFRFEWKFA VAASLTAFFD LILTIAYMSL LGREFDLTVL AGLLSVMGFA INDIIVVFDR VRENFRSLRV EPLEVLNRSI NQTLSRTVIT AVMFFLSAFA LYLYGGRSME GLAETHMAGA VIVVVSSVVM AVPLLTIGPL KVSKQDLLPK AKDLESLERR P
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