| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0087 |
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| Symbol | alaS |
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| ID | 6202866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 119200 |
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| End bp | 121854 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641701616 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001828818 |
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| Protein GI | 182680658 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000138455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAC CTACCAAATT TACCACTTCA AAGATTCGTA GCGATTTTCT AGAATTTTTC
AAGAATAAAG GCCACAAAAT CGTGCCTTCC GCGCCGTTGG TTCCAAGCAA CGATCCGACC
TTGCTGTTCA CTAATTCCGG GATGGTCCAG TTCAAGGACG TGTTTCTAGG GGCAGAGAAG
CGCAGTGAGG TCCGTGTGGC TGATGTGCAA TGCTGCTTAC GTGCCGGTGG TAAGCACAAT
GACCTGGATT CGGTTGGTTA CACAGCACGT CATCACACTT TCTTTGAGAT GCTCGGTAAT
TGGTCGTTTG GTGATTATTT TAAGAAGGAA GCGATCATGT GGGCCTGGGA GTTGCTGACC
CAGGTTTGGG AGTTGCCCCC CGAACGTCTG TTGGTGACGG TGTACCACAC TGACGATGAG
TCCTACGCAT TGTGGCGTGA CATGGTGGGT GTGCCGGAAG ATCGAATCGT CCGTATTGGC
GATAACAAAG GTGCGCCGTT TGCCTCGGAT AATTTCTGGC AAATGGCCGA TACCGGCCCG
TGTGGTCCAT GCACCGAGAT CTTCTACGAT CATGGGGAGC ACATTCCAGG GGGGCCTCCT
GGTTCCCCGG GTGAAGATGG AGATCGTTTC ATTGAAATAT GGAATTTGGT GTTCATGCAG
TTTGATCGTC AGTCTGACGG TACGTTAGTG CCTCTGCCGA CGCCCTGTGT GGATACAGGA
ATGGGCTTGG AGCGTTTGGC GGCGATCCTG CAGCATGTAC ACACTAACTA TGAGATTGAT
TTATTTCAGA CCCTGATCCT CAAGGCCGCC GAATTAACTG CTGTTGCGGA CGTGCAGAAC
AAATCGTTGT GCGTGATTGC TGACCATAGT CGTGCGTGTG CGTTTTTGAT CGTCGATGGG
GTGCTTCCGT CCAATGAAGG CCGTGGTTAT GTCTTACGTC GGATCATCCG CCGTGCGCTG
CGTCATGGTT GGATGTTGGG GGTACGTCAA CCGTTCTTCA ACAACATGGT GCCAACCTTG
ATTGCGGTGA TGGGCGATGC TTATCCCAAG CTACAGGCTG CAGCTGAATC GGTGATGCGT
ACTCTCCTGG CTGAGGAAGA GCGTTTTGCC GAGACTTTGG ATGTTGGGAT GAAGATCTTT
AACGAGGTGG CTGCCAAGGT TGCCAATGGT GTGATCCCGG GTAGCGATGC GTTCCGTTTA
TACGATACCT ATGGTTTTCC TGTTGATTTG ACCGCTGATA TTGCGCGTGA GCGTGGTATG
AGGGTGGACA TGGCCGGTTT CGAAGCTGCA ATGACGCAAC AGCGCAAGAC TGCGCGCGCT
GCGGGTAAGT TTGGGCGTGG TGTGCAATTG TCTGCTGAAC GGGCCGCGAC GTTGTCACCC
ACGGTGTTCC TGGGCTATGA GCAGCTTCAG GCCGATGACC TGAGAGTGGT TGCGTTGTTG
TCTGATGGCG GGCTAACTGA TTCGGCGTCG GTCGGTGATG AGGTGATTGT GTTGACCGAC
CGTACACCTT TTTACGCTGA GTCTGGTGGT CAAGTGGGTG ATATTGGAAC GTTGATGGCA
TCCGATGGAG TTCGTCTGGA GGTGACTGAT ACGCAAAAGT TAATGGGTCA GTTCCACGGA
CATGTTGCTC GTATTGTGCA AGGTGGGGTG AAGGTCGGCG ATGTGTTGTC CGGTAGCGTT
GCTGTTGCCA GACGAAAAAT GGTTGCTCTT AACCATTCAG CCACTCACCT GTTGCACTGC
GCGCTGCGCA GCGTGTTTGG TACTCACGTG GTGCAAAAAG GTTCTTTGGT TGCGCCGGAT
CGCCTGCGTT TCGACTTTTC ACATTTTGAG CCTATCTCGG CTGCACAAAT GACATTAATT
GAACGGATGG TCAACGATGA GGTGCGTGCT AATCATCTGG TGATGATCGA GCAAATGGGG
ATGCAGGCTG CGTTGGATGC TGGTGCGATG GCGCTATTTG GAGAGAAATA TGGAGAGCAT
GTGCGCGTAG TAACGATGGG CACTTCGGTC GAACTCTGCG GTGGTACCCA TATCACCCGT
ACGGGTGACA TTGGTTTGTT TAAGATCATT TCCGAGTGTG GCGTGTCCTC TGGAGTGCGT
CGTATTGAGG CTGTGACGGG CGAAAGCGCG TTAAATCATG TCTTGGCCGA AGAGCATCGT
TTGTACGAAG TGGCTGGCCT TATTGGTAGT AACGCGAACA ATGTGGTCAA TCATATTCGC
CAACTCACTG ATCGTCAGAA GACATTGGAG CGTGAACTCG AGAAGCTCAA AGGAAAGCTG
ATCTCCGGAA CGATTACCGA TTTGCTCAGC ATGGCGGTCA ATGTGGCCGA TGTAAAAGTA
GTCGCCGCGC GTCTTGATGG TTTGGATGGG AAGGCACTAC GTGAGGCGCT TGATCGACTT
AAATTGCAGC TGAGTGATGC CGTAATAGTC CTTGCGGGGG TGACCGGCGG CAAGGTGGCT
TTGGTGACTG CTGTCAATGG TCCTCGCGCA ATGGGTAAGG TGAAGGCCGA TACATTACTT
TCGCACGTTG CTACTCAAAT CAACGGCAGG GGAGGTGGCC GTGTTGATTT TGCTCAGGGC
GGCGGTGAGG ATGGACCTTC TCTTCGTTCC GCTCTTGACG GTGTTGCTAC GTGGGTCAAG
CAGCATCTGA ACTGA
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| Protein sequence | MNIPTKFTTS KIRSDFLEFF KNKGHKIVPS APLVPSNDPT LLFTNSGMVQ FKDVFLGAEK
RSEVRVADVQ CCLRAGGKHN DLDSVGYTAR HHTFFEMLGN WSFGDYFKKE AIMWAWELLT
QVWELPPERL LVTVYHTDDE SYALWRDMVG VPEDRIVRIG DNKGAPFASD NFWQMADTGP
CGPCTEIFYD HGEHIPGGPP GSPGEDGDRF IEIWNLVFMQ FDRQSDGTLV PLPTPCVDTG
MGLERLAAIL QHVHTNYEID LFQTLILKAA ELTAVADVQN KSLCVIADHS RACAFLIVDG
VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFNNMVPTL IAVMGDAYPK LQAAAESVMR
TLLAEEERFA ETLDVGMKIF NEVAAKVANG VIPGSDAFRL YDTYGFPVDL TADIARERGM
RVDMAGFEAA MTQQRKTARA AGKFGRGVQL SAERAATLSP TVFLGYEQLQ ADDLRVVALL
SDGGLTDSAS VGDEVIVLTD RTPFYAESGG QVGDIGTLMA SDGVRLEVTD TQKLMGQFHG
HVARIVQGGV KVGDVLSGSV AVARRKMVAL NHSATHLLHC ALRSVFGTHV VQKGSLVAPD
RLRFDFSHFE PISAAQMTLI ERMVNDEVRA NHLVMIEQMG MQAALDAGAM ALFGEKYGEH
VRVVTMGTSV ELCGGTHITR TGDIGLFKII SECGVSSGVR RIEAVTGESA LNHVLAEEHR
LYEVAGLIGS NANNVVNHIR QLTDRQKTLE RELEKLKGKL ISGTITDLLS MAVNVADVKV
VAARLDGLDG KALREALDRL KLQLSDAVIV LAGVTGGKVA LVTAVNGPRA MGKVKADTLL
SHVATQINGR GGGRVDFAQG GGEDGPSLRS ALDGVATWVK QHLN
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