| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0078 |
|---|
| Symbol | |
|---|
| ID | 6202675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 107111 |
|---|
| End bp | 107890 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641701607 |
|---|
| Product | methionine aminopeptidase |
|---|
| Protein accession | YP_001828809 |
|---|
| Protein GI | 182680649 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCTG TTAACCTGAA AACCAAAGAA GAGATTGAAC AAATGCGCAT CGCTGGCCGC
TTGGCTGCTA CGGTGCTTGA TGTGGTCGCG CCATACGTGA AGCCGGGTGT GACTACCGCA
GAACTCGACC AGATCTGCCA CAACTATATT GTGACGGTAC AGGGCGCGAT TCCGGCTAAC
CTTGGCTATC GCGGCTTTCC TAAGACGATA TGCACTTCGG TCAATAATGT CATTTGCCAT
GGTATTCCTA GCGATGCCAA GGTCCTGAAA GACGGCGACA TCATCAATAT CGACGTGACT
GTCATCAAGG ACGGTTGGCA TGGCGATACA AGTCGCATGT ATTACGTCGG TAACCCCTCG
GTGATGGCGC GCCGACTCGT GGAAACCACT TACGAGGCAA TGTGGCGTGG CATCCGTGCC
GTTAAACCTG GTGCGACGCT TGGTGACATT GGCCACGCCA TTCAAACCTA CGCCGAAAAC
GAACGCTTTA GCGTTGTCCG CGAATACTGT GGTCACGGTA TCGGCAAGGT CTACCACGAC
AATCCGCAGG TACTACATTA CGGCCGTCCT GGCGAGGGAC TGGTGCTGGA ATCAGGAATG
ACCTTCACGA TCGAGCCAAT GATCAATGAA GGAACCCGCC ACCATAAGGT ATTGCCCGAT
GGCTGGACCG TGGTTACCAA GGATCGCAAA CTGTCAGCGC AGTGGGAACA TATGATTGCA
GTCACTGAAG ACGGCGTGGA TGTGTTGACC CTATCGCCTA ACGACATCGG CAGTACATAA
|
|---|
| Protein sequence | MVAVNLKTKE EIEQMRIAGR LAATVLDVVA PYVKPGVTTA ELDQICHNYI VTVQGAIPAN
LGYRGFPKTI CTSVNNVICH GIPSDAKVLK DGDIINIDVT VIKDGWHGDT SRMYYVGNPS
VMARRLVETT YEAMWRGIRA VKPGATLGDI GHAIQTYAEN ERFSVVREYC GHGIGKVYHD
NPQVLHYGRP GEGLVLESGM TFTIEPMINE GTRHHKVLPD GWTVVTKDRK LSAQWEHMIA
VTEDGVDVLT LSPNDIGST
|
|---|
| |