| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0076 |
|---|
| Symbol | rplS |
|---|
| ID | 6202603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 106277 |
|---|
| End bp | 106687 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641701605 |
|---|
| Product | 50S ribosomal protein L19 |
|---|
| Protein accession | YP_001828807 |
|---|
| Protein GI | 182680647 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC TGAATAAGTC TATTATTGCA GAGTTTGAAT CTGCCCAGAT CACCCGCCAA
GTGCCGCAGT TCAGCCAGGG TGACACTATC GTTGTCAACG TTAAAGTGAA AGAAGGTAAC
AGAGAGCGCT TGCAAGCTTA CGAAGGCGTG GTTATTGCCA CCAAGAATGC AGGTCTTAAT
TCCGCTTTCA CGGTACGTAA GATCTCTCAT GGTTATGGTG TCGAGCGTGT GTTCCAGACC
CATAGTCCCA TCATTGAATC GATAGAAATC AAGCGTCGCG GTAAAGTGCG TGCCGCTAAG
CTTTATTACT TGCGTGGTTT GGAAGGCAAA GCCGCCCGCA TCAAAGAAGA CTTGGCTGCT
ACCGCCCATG AGAAGCTGGC CCGCAAAACA GTCACTGCCA AAGCAGGTTA A
|
|---|
| Protein sequence | MSKLNKSIIA EFESAQITRQ VPQFSQGDTI VVNVKVKEGN RERLQAYEGV VIATKNAGLN
SAFTVRKISH GYGVERVFQT HSPIIESIEI KRRGKVRAAK LYYLRGLEGK AARIKEDLAA
TAHEKLARKT VTAKAG
|
|---|
| |